| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_1719 |
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| Symbol | |
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| ID | 4310325 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008390 |
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| Strand | - |
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| Start bp | 1900650 |
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| End bp | 1901834 |
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| Gene Length | 1185 bp |
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| Protein Length | 394 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 638149533 |
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| Product | cystathionine beta-lyase |
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| Protein accession | YP_773609 |
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| Protein GI | 115351770 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0626] Cystathionine beta-lyases/cystathionine gamma-synthases |
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| TIGRFAM ID | [TIGR01324] cystathionine beta-lyase, bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTGCAT CCACTCCGAA GCGCGCACTC CAGACCCGCA TCGTTCAACC CGACGACGTC
ATTCCGGACG GCTTCCGTTC GTTCGTGCCG CCGGTTGCGC GTGCATCGAC GGTCGTGTTC
CCCGATCTCG CGACGATGCG CGCGCTGGTC TGGCACAACG ACAACCAGTG GCGCTACGGC
CTGCACGCGA CCCCGACGTC GCTGGCGCTC GCGCAGCGGC TGGCCGAGAT CGAGGGCGGC
ACGCATGCGC TGCTGCAGCC GTCGGGCCTC GCGGCGATCA TGAACGTCTA TTTCGGGATC
GTGAAGGCGG GCGACGACGT GCTGATCCCG CACAACGTCT ACGGGCCGAA CGCCGATTTC
GGTAACTGGC TCGCGAAGGA TTTCGGCATC ACCGTACGCT TCTACGATCC GCTCGTCGGC
GCTGGAATTG CCGAGCTGAT CCAGCCGAAC ACGCGCTTGA TCTGGATCGA GGCGCCGGGT
TCGGTGACGA TGGAAGTGCC CGACGTGCGC GCGATCACGA CGGTCGCGCA GGCGCGCGGC
ATCGTCACCG CGATCGACAA CACGTATTCG GCCGGGCTCG CGTTCAAGCC GTTCGAGCAT
GGCGTCGACA TCTCGGTGCA GGCGCTGACC AAGTATCAAT CGGGCGGCAG CGACGTGCTG
ATGGGCGCGA CGATCACCGC GAACGCCGAG CTGCACGCGC AACTGAAGCT CGCGCGGATG
CGCTGCGGGA TCGGCGTTTC GGTCGACGAT TGCTCGCTCG TGCTGCGCAG CCTGCCGAGC
ATGCAGGTGC GCTTCGATGC ACACAGCAAG AGCGCGCTGG CGCTCGCGCA GTGGCTGAAG
GCGCGGCCGG AGATCGCGGC CGTGCTCCAT CCGCAGTTGG CCGATTGCCC GGGACACGCG
TCGTTCGTGC GCGACTTCAC CGGCGCGGGC GGGCTGTTCT CTGTGGTATT CGACGAACGC
TACAGCAGCG AGCAGATCGA TCGTTTCGTC GAGGCGCTCG AGCTGTTCGC GATCGGCTGG
AGCTGGGGCG GCGCATGCAG CCTCGCGATG CCTTACGACG TCGCGTCGAT GCGTGCAGAC
TGGCCGCATC GCGGCACGCT GGTGCGCTTC TACGTCGGTC TCGAGGACGA AGCCGACCTG
CGCGCGGACA TCGAGCGTGC GATGCAGGCT ACGCTCGGCC GATAA
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| Protein sequence | MTASTPKRAL QTRIVQPDDV IPDGFRSFVP PVARASTVVF PDLATMRALV WHNDNQWRYG
LHATPTSLAL AQRLAEIEGG THALLQPSGL AAIMNVYFGI VKAGDDVLIP HNVYGPNADF
GNWLAKDFGI TVRFYDPLVG AGIAELIQPN TRLIWIEAPG SVTMEVPDVR AITTVAQARG
IVTAIDNTYS AGLAFKPFEH GVDISVQALT KYQSGGSDVL MGATITANAE LHAQLKLARM
RCGIGVSVDD CSLVLRSLPS MQVRFDAHSK SALALAQWLK ARPEIAAVLH PQLADCPGHA
SFVRDFTGAG GLFSVVFDER YSSEQIDRFV EALELFAIGW SWGGACSLAM PYDVASMRAD
WPHRGTLVRF YVGLEDEADL RADIERAMQA TLGR
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