| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_1713 |
|---|
| Symbol | |
|---|
| ID | 4310319 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria AMMD |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008390 |
|---|
| Strand | + |
|---|
| Start bp | 1895206 |
|---|
| End bp | 1896009 |
|---|
| Gene Length | 804 bp |
|---|
| Protein Length | 267 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 638149527 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_773603 |
|---|
| Protein GI | 115351764 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0390] ABC-type uncharacterized transport system, permease component |
|---|
| TIGRFAM ID | [TIGR00245] conserved hypothetical protein TIGR00245 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCCGT CGTTGCAGGA GCTGAGTCTC GTCGACGTCG GCATCGCCGC CGGCCTCGTC
GCGGTCAACG GCGCGATTTC GGCCGCGCTG TCGCTCGGCC TCGGGCGCAA GCTCGCGCTC
GCTGCCGTGC GCACCGTCGT GCAGCTGCTC GCGATCGGCT ACGTGCTCGG CTGGGTGTTC
GGCCATCCGC ACTGGAGCGT CGTGCTGCCG ATCACCGCGC TGATGACGTT GATCGCCGGC
TTTGCGGGCG CCGGTCGCGG CAAGCATGCG TATCGCGGAC AACGCGTCGA CAGCATCGCG
TCGATCTGGT TCAGCAGCTG GTTCGTCGCG GCGATCGGCC TGTTCGTCGT GATCCGCATT
CATCCGTGGT ACACGCCGCA ATATGTGATC CCGATCCTCG GGATGATCCT CGGCAATACG
CTGACGGGCG TGTCGCTCGG CGTCGAGCGG ATGATGGAGG AACTGACCGC GCGGCGCGAC
CGCGTCGAGA CCGCACTCGC GCTCGGCGCA ACGCGCTGGG AAGCCGCGCA GGACGCCGCG
CGCCAGGCCG TGCGCGCAGG CATGCTGCCG ACGCTCAACC AGATGGCCGT GGTCGGCGTC
GTGAGCCTGC CGGGGATGAT GACGGGTCAG GTGCTGGCCG GCCAGTCGCC GCTGCAGGCC
GTGCGCTATC AGATCGTGAT CATGTTCCTG ATCGCCGCGG CATCCGCGCT CGGTACCGTC
GGCGCGGTGC TGATGACGTA TCGCCGGCTG TTCTCGGCCG ATCACCGCTT TCTCGCGTCG
CGGCTAGAGG AGCGCACGCC GTGA
|
|---|
| Protein sequence | MSPSLQELSL VDVGIAAGLV AVNGAISAAL SLGLGRKLAL AAVRTVVQLL AIGYVLGWVF
GHPHWSVVLP ITALMTLIAG FAGAGRGKHA YRGQRVDSIA SIWFSSWFVA AIGLFVVIRI
HPWYTPQYVI PILGMILGNT LTGVSLGVER MMEELTARRD RVETALALGA TRWEAAQDAA
RQAVRAGMLP TLNQMAVVGV VSLPGMMTGQ VLAGQSPLQA VRYQIVIMFL IAAASALGTV
GAVLMTYRRL FSADHRFLAS RLEERTP
|
|---|
| |