Gene Bamb_1690 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_1690 
Symbol 
ID4310297 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008390 
Strand
Start bp1870691 
End bp1871875 
Gene Length1185 bp 
Protein Length394 aa 
Translation table11 
GC content72% 
IMG OID638149505 
Productisochorismate synthases 
Protein accessionYP_773581 
Protein GI115351742 
COG category[H] Coenzyme transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1169] Isochorismate synthase 
TIGRFAM ID[TIGR00543] isochorismate synthases 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATGCGA TTTCCCGACC TGATGAATTA TTAGTACCCC ATAGCGTGTG GGGTGTGTAT 
CGCGCGGATA CCCCGCTGTT TCTCGCAACG CCCGCGCATA CGCTGCTGGT CTGCGATGTC
GCGGAGGCGA TCCCGCATGC GAACGCACCG CTCGCGGCGC GCGTGAACCA CGCGTTGCAG
CGCGCGCGGG CCGACGGCCA CGCGGGCGCG GCGGTAGTCG GTGCGGTGCC GTTCGACGTC
GACGCGCCGG CCGTGCTGCG GGTCGCGCGC ACGATGCTGC GCGCGCGGCC ACTCGGCGCG
CAGCGGGCAG CCGTGCCGGC CGGTACGCGC TACGCGACGC GCGAGGTGCC GGCCGCGGAT
GCCTATGCGG ACGCGGTCGC GCAGGCGGTC GCCAGGATTC GCGCGGGCGA GCTCGACAAG
GTGGTGCTGG CGCGCACGCT GGAGGCGACC GGCGACGCAC CGGTCGACGT TGCGGCGCTC
GTCGCGCGGC TGGCGTCGTG TAATCCGCAC GGCTATACGT TCTCCGTGGA TCTCGGCGCG
GGTCGCACGC TGCTGGGCGC GAGCCCGGAG CTGCTCGTGA ACCGCTTCGG CAGCGTCGTG
CGCGCGAATC CGCTCGCGGG CTCCGCGCCG CGCAGCCGTG ATCCGGTCGA GGACCGGCGC
CGCGCGCAGG CGCTGCTGGC GTCCGCGAAG GATCTCGACG AGCACCGGGT CGTCGTCGAA
GCCGTGCGCG AGAACCTCGC GCCGCTGTGT CGGCGGCTCG ACGTGCCGGC ACGCCCGTCG
CTCGTCCATA CGGAAACGAT GTGGCATCTG TCGACCGAGG TGTGCGGCGA AACCGATGCG
GATGCGTTGA CGCTCGCACT CGCGCTGCAT CCGACGCCCG CCGTCTGCGG CGCGCCGCGC
GCGGCGGCGC GCGACTGCAT TCGCGATGCC GAGCCGTTCG ATCGCGGCTT CTACGCGGGG
ATGCTCGGCT GGGTCGACGC ACGGGGCGAC GGCGAGTGGG TCGTCACGAT CCGCTGCGCC
GAAGCGTTCG ACCGCACGCT GCGGCTCTAT GCGGGCGCGG GCGTGGTCGG CGAATCGACG
CCCGACGGCG AACGCGCGGA AACCGCCGCC AAGTTCCGGA CGATGCTGGA TGCGCTCGGT
ATCGATCGCG ATGCCGCAAC GGGCGCCGCG CGGGAGTTCG CATGA
 
Protein sequence
MNAISRPDEL LVPHSVWGVY RADTPLFLAT PAHTLLVCDV AEAIPHANAP LAARVNHALQ 
RARADGHAGA AVVGAVPFDV DAPAVLRVAR TMLRARPLGA QRAAVPAGTR YATREVPAAD
AYADAVAQAV ARIRAGELDK VVLARTLEAT GDAPVDVAAL VARLASCNPH GYTFSVDLGA
GRTLLGASPE LLVNRFGSVV RANPLAGSAP RSRDPVEDRR RAQALLASAK DLDEHRVVVE
AVRENLAPLC RRLDVPARPS LVHTETMWHL STEVCGETDA DALTLALALH PTPAVCGAPR
AAARDCIRDA EPFDRGFYAG MLGWVDARGD GEWVVTIRCA EAFDRTLRLY AGAGVVGEST
PDGERAETAA KFRTMLDALG IDRDAATGAA REFA