Gene Bamb_1689 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_1689 
Symbol 
ID4310296 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008390 
Strand
Start bp1869078 
End bp1870694 
Gene Length1617 bp 
Protein Length538 aa 
Translation table11 
GC content71% 
IMG OID638149504 
Product2,3-dihydroxybenzoate-AMP ligase 
Protein accessionYP_773580 
Protein GI115351741 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1021] Peptide arylation enzymes 
TIGRFAM ID[TIGR02275] 2,3-dihydroxybenzoate-AMP ligase 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGTCCG CGAAATGCAC GCCGTGGCCG GACGCGTTCG CCGAGGCGTA TCGGCAGAAG 
GGGTACTGGC TCGGCCAGTC GTTCGCGCAA TGGTTCGACG AACGCGTCGC GCGGCACGCC
GAACGCGTCG CGCTCGTACA GGGCGACCTG CGCTGGTCGT ACCGGACGTT CGCGGCGGAA
GCCGAGCGCA CGGCCCGTGC GTTGACCGCG TGCGGGATCG TGCCGGGCGA GCGCGTCGTC
GTGCAGTTGC CGAACTGCGT CGCTTTCTTC GCGGTGACGT TCGCGCTGTT CCGGATCGGC
GCACTGCCGG TGTTTGCGCT GCCCGCGCAT CGCCGGCGCG AGATCGGCTA CTTTTGCCGG
CACGCGGGCG CGGTCGCCTA TGTCGCGGCG GAACGGCACG ACGGGTTCGA CTACAGGGCG
CTCGCGAGCG AGATCCGCGC CGACGCGCCG ACGCTGCGCC ACATGCTGTT CACCGCGCCC
GGCAATACGC GCGTCGCACT GCCGGAGCCG ACGCCCGACG TCGCGCTGCC GCCGGGGCCC
GGCGCGCACG AGGTCGCGTT CCTGCAACTG TCGGGTGGCA GCACGGGTAC GCCAAAGCTG
ATCCCGCGCA CGCACGACGA CTATCTGTAC AGCGTGCGCG AGAGCGCGCG CATTTGCGGG
CTGACCGAGC GCAGCGTCTA TCTCGCGGCG CTGCCGGCCG CGCATAACTA TGCGCTGAGT
TCGCCGGGTT CGCTCGGCGT CTTCGATGCC GGCGGCACCG TCGTGCTGAG CGACGGCGCG
AGCCCTGATG CCGCGTTCCC GCTGATCGAG CGCGAGCGCG TGACAGTGGC GGCACTGGTG
CCGCCACTCG TGCCCGTGTG GTTGGCAGCG GCCGGGCAGC GGCGCGGCGC GCTCGCGAGC
CTCGAACTCG TGCAGGTCGG CGGCGCGCGC TTCGATCCGG CGCTCGCGGC CCGCGCGGCC
GACGGCTTCG GCGCGCAATT GCAGCAGGTG TTCGGGATGG CCGAAGGGCT CGTCAACTAC
ACGCGGCTCG ACGATCCGCG CGACGTGGTG ATCGCCACGC AGGGGCGCCC GATCTCGCCG
GACGACGAGG TCCGCATCGT CGACGACGAC GACCGCCCGG TCGCACCCGG TGAGGTCGGC
CATCTGCTGA CGCGCGGCCC GTACACGATC CGCGGCTACT ACGACGCAGC CGCGCACAAC
GCGCGCGCGT TCACGGCGGA CGGCTTCTAT CGCACCGGCG ATCGCGTCCG CCTGACGGCG
GGCGGCCAGA TCGTCGTCGA GGGGCGCGCG AAAGACCAGA TCAACCGCGG CGGCGAGAAG
ATCCCGGCCG AGGAGATCGA ACACCTGCTG CTCGCGCATC CGGGTGTCGT CGACGCGGCG
CTGGTCGCGA TGCCCGACCC GTATCTCGGC GAACGCAGTT GTGCGTACGT GATTCGCGGC
GTGCCGGCGC CGGCCGCGGC GGATCTCGTG CGCTTCGTGC GTGAGCAGGG CGTGGCGGCG
TACAAGGTGC CCGACCGGAT CGAATTCGTC GACGCATTCC CGAAAACGCC GGTCGGCAAG
ATCGACAAGC GCGCGCTTCG ACAGCACATC GCGGATCGGC TCGCCGCCGC CGCTTGA
 
Protein sequence
MTSAKCTPWP DAFAEAYRQK GYWLGQSFAQ WFDERVARHA ERVALVQGDL RWSYRTFAAE 
AERTARALTA CGIVPGERVV VQLPNCVAFF AVTFALFRIG ALPVFALPAH RRREIGYFCR
HAGAVAYVAA ERHDGFDYRA LASEIRADAP TLRHMLFTAP GNTRVALPEP TPDVALPPGP
GAHEVAFLQL SGGSTGTPKL IPRTHDDYLY SVRESARICG LTERSVYLAA LPAAHNYALS
SPGSLGVFDA GGTVVLSDGA SPDAAFPLIE RERVTVAALV PPLVPVWLAA AGQRRGALAS
LELVQVGGAR FDPALAARAA DGFGAQLQQV FGMAEGLVNY TRLDDPRDVV IATQGRPISP
DDEVRIVDDD DRPVAPGEVG HLLTRGPYTI RGYYDAAAHN ARAFTADGFY RTGDRVRLTA
GGQIVVEGRA KDQINRGGEK IPAEEIEHLL LAHPGVVDAA LVAMPDPYLG ERSCAYVIRG
VPAPAAADLV RFVREQGVAA YKVPDRIEFV DAFPKTPVGK IDKRALRQHI ADRLAAAA