| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_1681 |
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| Symbol | |
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| ID | 4311002 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008390 |
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| Strand | - |
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| Start bp | 1858250 |
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| End bp | 1859440 |
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| Gene Length | 1191 bp |
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| Protein Length | 396 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 638149496 |
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| Product | 2-nitropropane dioxygenase, NPD |
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| Protein accession | YP_773572 |
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| Protein GI | 115351733 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2070] Dioxygenases related to 2-nitropropane dioxygenase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.097418 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCGCAC GCACTTCCTT CCCGCCGCTC GAGATTCGCG GCCGCACCTT GTTGCCCGTG
GTGCAGGGCG GCATGGGCGT CGGCATTTCC GCGCACCGCC TCGCCGGCAG CGTCGCGCGC
GAAGGCGCGC TCGGCACGAT CGCCAGCATC GACCTGCGTC ACCACCATGC GGACCTGCTC
GCGCGCTGCC GCGCGAATCC CGACCGCGCG ACGCTCGAAG CCGCGAACCT CGACGCGCTC
GCGCGCGAGA TTCGCCTCGC GAAAACCTAC AGCGAAGGGC GCGGGATGAT CGCAGTCAAC
GTGATGAAGG CGGTGAGCGC GCATGCGGAC TACGTGCGCG TCGCGTGCGA CGAGGGCGCG
GATGCGATCG TGATGGGCGC CGGCCTGCCG CTCGATCTGC CCGACCTCAC GCAGGGGTAC
GACATCGCGC TGATCCCGAT CCTGTCGGAC AGCCGCGGCA TCGCGCTGGT GCTGAAGAAG
TGGATGAAGA AGGGGCGGCT GCCCGATGCG ATCGTGATCG AGCATCCCGC GCATGCGGGC
GGCCACCTCG GCGTCACGCA GATCGACGAC ATGCACGATG CGCGCTTCGA TTTCGCGCGC
GTGCTCGACG AGACCGCGCA GGTGATGGCG TCTCTCGGCC TCGCGCGCGA CACGATCCCG
CTGATCGTTG CGGGCGGGAT CAACAGTCAC GACACGGTGC GCGCGGCGCT GGCGGCCGGC
GCGAACGGCG TGCAGGTGGG CACCCCGTTC GCGGTGACGG AGGAGGGCGA TGCGCATCCG
AACTTCAAGC GTGTGCTGGC CGATGCGCAG CCCGATGACA TCGTCGAATT CGTCAGCGTG
ACGGGGCTGC CGGCGCGCGC GGTGAAGACG CCCTGGCTCG ATCGCTACCT GCGCAACGAA
ACGCGGATTC GCAACAAGCT CGGCGCGTTC CGGCAGCGCT GCCCGACCGC GCTCGAATGC
CTGAGCGTCT GCGGGCTGCG CGACGGCATC GAGAAGTTCG GCCATTTCTG CATCGACACG
CGGCTCGCGG CCGCGCTGCG CGGCGACGTC GCGAACGGCC TGTTCTTCCG CGGCCGCGAA
GCGCTGCCGT TCGGCAACGC GATCCGCAGT GTGCGCGATC TGCTCGATCT GCTGCTGACG
GGCCGCGCGG CGGAGCCTGC GACAAACCGT CCGATGTTTA CGCTGGCTTG A
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| Protein sequence | MIARTSFPPL EIRGRTLLPV VQGGMGVGIS AHRLAGSVAR EGALGTIASI DLRHHHADLL
ARCRANPDRA TLEAANLDAL AREIRLAKTY SEGRGMIAVN VMKAVSAHAD YVRVACDEGA
DAIVMGAGLP LDLPDLTQGY DIALIPILSD SRGIALVLKK WMKKGRLPDA IVIEHPAHAG
GHLGVTQIDD MHDARFDFAR VLDETAQVMA SLGLARDTIP LIVAGGINSH DTVRAALAAG
ANGVQVGTPF AVTEEGDAHP NFKRVLADAQ PDDIVEFVSV TGLPARAVKT PWLDRYLRNE
TRIRNKLGAF RQRCPTALEC LSVCGLRDGI EKFGHFCIDT RLAAALRGDV ANGLFFRGRE
ALPFGNAIRS VRDLLDLLLT GRAAEPATNR PMFTLA
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