Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_1672 |
Symbol | |
ID | 4310993 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008390 |
Strand | - |
Start bp | 1848203 |
End bp | 1849024 |
Gene Length | 822 bp |
Protein Length | 273 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 638149487 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_773563 |
Protein GI | 115351724 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1177] ABC-type spermidine/putrescine transport system, permease component II |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGCCGA ATCGCTACCT GCAGTTCGCG GCGCTGTTTG CCGGCTTCGC GTTCCTGTAC ATCCCGATCA TCAGCCTGAT CGTCTATTCG TTCAACGAGT CGAAGCTCGT CACCGTCTGG TCGGGCTTCT CGTTGCGCTG GTACGCGGCG CTCGTGGACG ACGACGAGCT GCTGACGGCC GCGTGGCTGT CGCTGAAGAT CGGCGTGCTG ACCGCGTTCG CGTCGGTGTT CATCGGCACG TGGGCCGGCT TCGTGCTTGC GCGCATGGGC CGCTTTCGCG GCTTCGCGCT GTTCAGCGGG ATGATCAACG CGCCGCTCGT GATCCCCGAG GTGATCCAGG GCATCTCGCT GCTGCTGCTG TTCATCGAGC TGGCGAAGTG GATCGGCTGG CCGGCCGAGC GCGGCGTGTT CACGATCTGG CTCGGCCACG TGATGCTGTG CATCTCGTAC GTCGCGATCA TCGTGCAGTC ACGCGTGCGC GAGCTGAACC CGTCGCTCGA GGAAGCCGCG CTCGATCTGG GCGCGACGCC GCTGAAGGTG TTCTTCACGA TCACGCTGCC GCTGATCTCG CAGGCGCTGA TCGCGGGCTG GCTGCTGGCG TTTACGCTGT CGATCGACGA CCTCGTGCTG TCGGCGTTCC TGTCGGGCCC CGGTTCGACG ACGCTGCCGC TCGTCGTGTT CTCGCGCGTG CGCCTCGGCC TGAACCCGGA GATGAACGCG CTCGCGACGC TGTTCATCAT CGCGGTGACG GCCGGCGTCG TGATCGCGAA CTTCGTGATG CTGCGCCAGG AACGCAAGCG GATGGCCGCG TTCGCCGTCT GA
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Protein sequence | MKPNRYLQFA ALFAGFAFLY IPIISLIVYS FNESKLVTVW SGFSLRWYAA LVDDDELLTA AWLSLKIGVL TAFASVFIGT WAGFVLARMG RFRGFALFSG MINAPLVIPE VIQGISLLLL FIELAKWIGW PAERGVFTIW LGHVMLCISY VAIIVQSRVR ELNPSLEEAA LDLGATPLKV FFTITLPLIS QALIAGWLLA FTLSIDDLVL SAFLSGPGST TLPLVVFSRV RLGLNPEMNA LATLFIIAVT AGVVIANFVM LRQERKRMAA FAV
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