Gene Bamb_1670 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_1670 
Symbol 
ID4310991 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008390 
Strand
Start bp1845594 
End bp1847273 
Gene Length1680 bp 
Protein Length559 aa 
Translation table11 
GC content72% 
IMG OID638149485 
Producthypothetical protein 
Protein accessionYP_773561 
Protein GI115351722 
COG category[R] General function prediction only
[S] Function unknown 
COG ID[COG0446] Uncharacterized NAD(FAD)-dependent dehydrogenases
[COG3453] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR01244] conserved hypothetical protein TIGR01244 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCATCC GCCCGCTGAC CGACCTGCTG TCGGTCTCGC CCCAGATCGC CGCGACCGAC 
CTGCCCGCGC TGCACGCGGC GGGCATCCGC GCGATCGTCT GCAACCGTCC GGACGGCGAA
GGCGCCGACC AACCGACCGT CGCCGAGATC CGCGCCGCCG CCGCGCCGCT CGGCATCGCC
GTGCATTACC TGCCCGTCGA TACCGGCAAG GTCACCGACG AGCAGGCCGC GCAGTTCGGC
GCGCTCGTCG CGACGCTCGC CGGCCCGGTC CTCGCGTACT GCCGCAGCGG CACGCGTTCG
GCGACGCTGT GGGCGCTGTC GCAGGCGGGC CGACGCCCGG CCGGCGACAT CGTCGCGAGC
GCCGCCGCGG CCGGCTACGA CCTCGGCGCG CTCGCGCCGC GTCTTGCGCA ACGCGTGGCG
CCAGGCGTCG ATCAGGCCGC ACCGGCCGTC GACGCGCGGC ACGACATCGT GATCGTCGGC
GCGGGCGCGG CCGGCGTCGC GGTCGCGTCG AGCCTGCTTG CGCGCGACGC GTCGCTCGAT
ATCGCGGTGA TCGATCCGGC CGATACCCAC TACTACCAGC CGGGCTGGAC GATGGTCGGC
GCGGGCGTGT TCCGGCCCGA CACGACCGCG CGCCGGATGG CCGACCTGCT GCCGCGCGGC
GTGACATGGA TCCAGGCGGC GGTCGCCGGC TTCGAACCCG ACGCGCACGC GGTCGTGCTC
GACGGCTGCC GGCGCATCGG CTACCGGAGG CTGGTCGTGT GCCCGGGGCT CAAGCTCGAC
TGGCACGCGA TCGACGGCCT CGCGCAAACC CTCGGCCGCA ACGGCGTCAC GTCGAACTAT
CGCTACGATC TCGCGCCGTA CACGTGGGAA CTGGTGCAGG CGTTCCGCGG CGGCAATGCG
CTGTTCACGC AGCCGCCGAT GCCGATCAAG TGCGCGGGCG CGCCGCAAAA GGCGATGTAC
CTGTCGTGCG ATCACTGGCG GCGCACGGGG CGCCTCGGCG CCGCGAACGT CGAGTTCCTG
AATGCGGGCG GCGCGCTGTT CGGCGTCGCC GACTACGTGC CCGCGCTGAT GGAATACGTG
AAACGCTATG ACATCGCGCT GTCGTTCGGC CACAACCTGG TCGCGATCGA CGGGCCGGCG
CGACGCGCGA CGTTCACACG CGCGCTGCCC GACGGCGGCA CCGAAACCGT CGAGCGGGCG
TTCGACATGA TCCACGTCGT GCCGCCGCAG AAGGCGCCCG ATTTCGTGCG CGCGAGCCCG
CTCGCCGACG CGGCCGGCTG GATCGACGTC GATCCGGCGA CGCTGCGGCA CAAGCGGCAC
GCGGACATCT TCGCGCTCGG CGACGTCACC AACACGACCA ACGCGAAAAC CGCCGCGGCC
GCACGCAAGC AGGCGCCCGT CGTCGCGCAC AACCTGCTCG CGTCGCTGGG CCGCGCACAC
GGCAACGCCG CGTACGACGG CTACGGATCG TGCCCGCTCA CCGTCGAGCG CGGCAAGATC
GTGCTCGCCG AATTCCTGTA CGGCGGCAAG GTCGCGCCGA CCTTCCCCGC GTGGCTGATC
GACGGCAAGC GCCCGTCGCG GCTCGCGTGG CTGCTCAAGG AGCGCGTGCT GCCGCCGCTC
TACTGGAAGG CGATGCTCAA GGGCCGCGAA TGGCTCGCGA AGCCCGCGAT CGCCCGTTGA
 
Protein sequence
MTIRPLTDLL SVSPQIAATD LPALHAAGIR AIVCNRPDGE GADQPTVAEI RAAAAPLGIA 
VHYLPVDTGK VTDEQAAQFG ALVATLAGPV LAYCRSGTRS ATLWALSQAG RRPAGDIVAS
AAAAGYDLGA LAPRLAQRVA PGVDQAAPAV DARHDIVIVG AGAAGVAVAS SLLARDASLD
IAVIDPADTH YYQPGWTMVG AGVFRPDTTA RRMADLLPRG VTWIQAAVAG FEPDAHAVVL
DGCRRIGYRR LVVCPGLKLD WHAIDGLAQT LGRNGVTSNY RYDLAPYTWE LVQAFRGGNA
LFTQPPMPIK CAGAPQKAMY LSCDHWRRTG RLGAANVEFL NAGGALFGVA DYVPALMEYV
KRYDIALSFG HNLVAIDGPA RRATFTRALP DGGTETVERA FDMIHVVPPQ KAPDFVRASP
LADAAGWIDV DPATLRHKRH ADIFALGDVT NTTNAKTAAA ARKQAPVVAH NLLASLGRAH
GNAAYDGYGS CPLTVERGKI VLAEFLYGGK VAPTFPAWLI DGKRPSRLAW LLKERVLPPL
YWKAMLKGRE WLAKPAIAR