| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_1663 |
|---|
| Symbol | |
|---|
| ID | 4310984 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria AMMD |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008390 |
|---|
| Strand | + |
|---|
| Start bp | 1839711 |
|---|
| End bp | 1840742 |
|---|
| Gene Length | 1032 bp |
|---|
| Protein Length | 343 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 638149478 |
|---|
| Product | MerR family transcriptional regulator |
|---|
| Protein accession | YP_773554 |
|---|
| Protein GI | 115351715 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0789] Predicted transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.350781 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGACTGA AAGTGGGAGA ACTGGCGAAA CGCAGCGGGC TGACCGTCCG CACGCTTCAT
CACTATCACG CGATCGGTCT GCTGACGCCT TCGGCGCGCG CCGACAACGG CTACCGGCTG
TACGACCGCC ACGACATCGC CCGGCTCCAC CAGATCCAGG CGTTGCGTCG CTTCGGACTG
TCGCTCGCCG AAATCGGCGA CCACCTGAAC CAGCCCGGCA CCACCCCGCT CGTCGATCTC
ATCTCGAAGC AGATCGCGCT GCTCGACCGT CAGCTCGCGC AGACCGCGCA GCTCCGCGAG
CGCCTCGTGA GCCTGCACGC GCAGCTCGCG GCGGGCACGG AGCCGGAACT GGCCGATTGG
CTCACCACAC TGGAGTTGAT GACCGTGTAC GACAAATATT TTTCCGAGGA AGAACTCGCG
CGCATGCCGA TGTACCAGAA GAGCCAGGCG GGCGACGCGG AATGGATTTC GCTCATCGGC
GAGGTCCGTG CGCTGCACGA CGCGGGCGTG CCGCCCGAGG ACGAGCGCGT GCGTGCGCTC
GCCGCGCGCT GGATGGCGCT GCTCGTGCGC GACACGAACA ACGACCCGCG GCTGCTCGCG
AAGCTGAACC TGATGCACGA ACGGGAACCG GCGATGCAGT CGAAGATCGG CATTTCGACC
GCGCTGCGCG ACTATGTGCT GCGCGCGACG GCGGAGACGA AAATGCGCAT TTTCGAGAAG
TATCTCGCGC CGGACGAGAT CCGCTTCATG CGGGCGCACT ACGGCGAACG CGCGATGGAA
TGGCCGCAAC TGATGGCCGA CGTGCGCGAC GCGATCGACG CGGGCGCGAC GCCCGATTCG
CCGCAAGGCC GCGCGCTCGC GCAGCGCTGG CTCGATCTGT TCTGCAGCTA CGCGGGCCAC
GATCCGGCCA CGCACGCCAA GTTTCGCCAC GCGCTGATGA ACGAGCCGGC GCTGACGAAG
GATTCGTGGA CCGACGACAC GCTGCTCGGT TTCGTGCGCG ACGCGATGGC GCAGCTTGCG
CCTGCGCGCT GA
|
|---|
| Protein sequence | MRLKVGELAK RSGLTVRTLH HYHAIGLLTP SARADNGYRL YDRHDIARLH QIQALRRFGL
SLAEIGDHLN QPGTTPLVDL ISKQIALLDR QLAQTAQLRE RLVSLHAQLA AGTEPELADW
LTTLELMTVY DKYFSEEELA RMPMYQKSQA GDAEWISLIG EVRALHDAGV PPEDERVRAL
AARWMALLVR DTNNDPRLLA KLNLMHEREP AMQSKIGIST ALRDYVLRAT AETKMRIFEK
YLAPDEIRFM RAHYGERAME WPQLMADVRD AIDAGATPDS PQGRALAQRW LDLFCSYAGH
DPATHAKFRH ALMNEPALTK DSWTDDTLLG FVRDAMAQLA PAR
|
|---|
| |