| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_1661 |
|---|
| Symbol | |
|---|
| ID | 4310982 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria AMMD |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008390 |
|---|
| Strand | + |
|---|
| Start bp | 1834830 |
|---|
| End bp | 1837973 |
|---|
| Gene Length | 3144 bp |
|---|
| Protein Length | 1047 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 638149476 |
|---|
| Product | acriflavin resistance protein |
|---|
| Protein accession | YP_773552 |
|---|
| Protein GI | 115351713 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG0841] Cation/multidrug efflux pump |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.302634 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGGCC CCCGCGAAGA AGGCCGCTTC AACCTGTCGG CATGGGCGCT GCGCCACCAG
GCGCTGGTCG TCTACCTGAT CGCGCTCGCG ACGCTCGCGG GCATCCTCGC GTACACGCGG
CTCGCGCAAT CCGAGGATCC GCCGTTCACG TTCCGCGTGA TGGTGATCCG CACGTTCTGG
CCCGGCGCGA GCGCGCGGCA GGTGCAGGAA CAGGTGACCG ACCGGATCGG CCGCAAGCTG
CAGGAAACGC CGGCCATCGA CTTCCTGCGC AGCTATTCGC GGCCCGGCGA ATCGCTGATC
TTCTTCACGA TGAAGGACGC GGCGCCCGTG AAGGACGTGC CCGAGACCTG GTACCAGATC
CGCAAGAAGG TCGGCGACAT CGGCTATACG CTGCCGCCCG GCGTGCAGGG CCCGTTCTTC
AACGACGAGT TCGGCGACGT CTACACCAAC ATCTGGACGC TCGAAGGCGA CGGCTTCACG
CCCGCGCAGC TCCACGACTA TGCGGACCAG CTGCGCACCG TGCTGTTGCG CGTGCCGGGC
GTCGGCAAGG TCGACTACTT CGGCGACCCC GACCAGCGGA TCTTCATCGA GGCCGACAAC
ACGCAGCTCA CGCGCCTCGG CATCTCGCCG CAGCAGCTCG GACAGGCCAT CAACGCGCAG
AACGACATCT CGTCGGCCGG CGTGCTGACG ACCGCCGACG ATCGCGTGTT CGTGCGGCCG
AGCGGCCAGT TCGACAACGT CGCGGCGATC GCCGACACGC TGATCCGGAT CAACGGCCGC
ACGTTCCGGC TCGGCGATCT CGCGACGGTG AAGCGCGGCT ATGACGATCC GGTCGTCACG
CAGATGCGCG CAAACGGCCA TGCCGTGCTC GGCATCGGCG TGACGATGCA GCCGGGCGGC
GACGTGATCC GGCTCGGCAA CGCGCTCGAT GCGGAATCGA AGGACCTGCA GGCGCAGCTG
CCGGCGGGCC TCAAGCTGAC GCTGGTGTCG AGCATGCCGC ACGCGGTCGC GCATTCGGTC
GACGATTTCC TGGAAGCCGT CGCCGAAGCC GTCGCGATCG TGCTGGTCGT GAGCCTCGTG
TCGCTCGGCC TGCGCACCGG GATGGTCGTC GTGATCTCGA TTCCGGTCGT GCTCGCCGTG
ACCGCCCTGT TCATGTACCT GTTCGACATC GGGCTGCACA AGGTGTCGCT CGGCACGCTG
GTGCTCGCGC TCGGGCTGCT CGTCGACGAC GCGATCATCG CGGTCGAGAT GATGGCCGTG
AAGCTCGAGC AGGGCTACAG CCGCGCGCGC GCCGCCGCGT TCGCGTACAC GAGCACCGCG
TTCCCGATGC TGACGGGCAC GCTCGTCACG GTGTCGGGCT TCCTGCCGAT CGCACTCGCG
AAGTCGAGCA CCGGCGAGTA CACGCGCTCG ATCTTCGAGG TGTCGGCGAT CGCGCTGATC
GCGTCGTGGT TCGCGGCCGT CGTGCTGATC CCGCTGCTCG GCTATCACCT GCTGCCCGAG
CGCAAGAAGC ACGCGCACGA AGCCCACCTG CCGGACGATC ACGAGCACGA CATCTACGAC
ACGCGTTTCT ACCAGCGGCT GCGCGGCTGG GTCGACTGGT GCATCGAGCG GCGCTTCGTC
GTGCTGCTGA TCACCGGCGC GCTCTTCGTC GTCGCGCTGA TGGGCTTCTC GCTCGTGCCG
CAGCAGTTCT TCCCGAGCTC GGATCGCCCC GAGCTGCTCG TGGACGTGCG ATTGCCCGAA
GGCGCGTCGT TCGCGGCGAC GCTGCGCGAG ACCGAGCGCC TCGAGAAAAT ACTCGACAAG
CGGCCCGAGA TCGATCATTC GGTGAACTTC GTCGGCAGCG GCGCGCCGCG CTTCTACCTG
CCGCTCGACC AGCAGCTGCA GTTGCCGAAC TTCGCGCAGT TCGTCGTCAC CGCGAAATCG
GTCAAGGATC GCGAGAAGCT CGCCGCCTGG CTCGAAACCA CGCTGCGCGA CCAGTTCCCG
GCCGTGCGCT GGCGCCTGTC GCGGCTCGAG AACGGCCCGC CCGTCGGCTA CCCCGTGCAG
TTCCGCGTGA GCGGCGACGA CATCGCGACG GTGCGATCGA TCGCCGAGAA GGTCGCGGCG
ACGATGCGCG GCGACGCGCG CACGGTGAAC GTGCAGTTCG ACTGGGACGA GCCGGCCGAG
CGCTCGGTGC GCTTCGAGCT GGACCAGAAG AAGGCGCGCG AGCTGAACGT GACGTCGCAG
GACGTGTCGA GCTTCCTCGC GATGACGCTG TCGGGCACGA CCGTCACCCA GTATCGCGAA
CGCGACAAGC TGATCGCGGT CGACCTGCGC GCACCGCGTG CGGACCGTGT CGACCCGGCG
AAGCTCGCGG GCCTCGCGCT GCCGACGCCG AACGGCCCCG TGCCGCTCGG CTCGCTCGGC
CGCTTCACGC CGGCACTCGA ATACGGCGTG GTGTGGGAGC GCGACCGCCA GCCGACGATC
ACCGTGCAGT CCGACGTACG CGCCGGCGCC CAGGGCATCG ACGTCACGCA TACGATCGAC
GGCAAGCTGA ATGCGTTGCG CACGCAACTG CCGGTCGGCT ACCAGATCAA CATCGGCGGG
TCGGTCGAGG AAAGCGCGAA AGCGCAGAAG TCGATCAATG CGCAGATGCC GCTGATGGCG
ATCGCGGTGT TCACACTGCT GATGATCCAG CTGCAGAGCT TCTCGCGCGT GCTGATGGTC
GTGCTGACCG CGCCGCTCGG GCTGATCGGC GTGGTCGGCA CGCTGCTGCT GTTCGGCCAG
CCGTTCGGCT TCGTCGCGAT GCTCGGCGTG ATCGCGATGT TCGGGATCAT CATGCGCAAC
TCGGTGATTC TGGTCGACCA GATCGAGCAG GACATCGCGG CCGGCCACGG ACGCCTCGAC
GCAATCGTCG GCGCGACCGT GCGGCGCTTC CGTCCGATCA CGCTGACGGC CGCGGCCGCC
GTGCTCGCGC TGATCCCGCT GTTGCGCTCG AACTTCTTCG GGCCGATGGC GACCGCGCTG
ATGGGCGGGA TCACGAGCGC GACCGTGCTG ACGCTGTTCT ACCTGCCCGC GCTGTACGCC
GCGTGGTTCC GCGTGAAGCG CGACGAACGC GACCCGCACG AACCGCCGCA CGACGGCACA
CCTGCCGCGC CGTCGGGAGC CTGA
|
|---|
| Protein sequence | MSGPREEGRF NLSAWALRHQ ALVVYLIALA TLAGILAYTR LAQSEDPPFT FRVMVIRTFW
PGASARQVQE QVTDRIGRKL QETPAIDFLR SYSRPGESLI FFTMKDAAPV KDVPETWYQI
RKKVGDIGYT LPPGVQGPFF NDEFGDVYTN IWTLEGDGFT PAQLHDYADQ LRTVLLRVPG
VGKVDYFGDP DQRIFIEADN TQLTRLGISP QQLGQAINAQ NDISSAGVLT TADDRVFVRP
SGQFDNVAAI ADTLIRINGR TFRLGDLATV KRGYDDPVVT QMRANGHAVL GIGVTMQPGG
DVIRLGNALD AESKDLQAQL PAGLKLTLVS SMPHAVAHSV DDFLEAVAEA VAIVLVVSLV
SLGLRTGMVV VISIPVVLAV TALFMYLFDI GLHKVSLGTL VLALGLLVDD AIIAVEMMAV
KLEQGYSRAR AAAFAYTSTA FPMLTGTLVT VSGFLPIALA KSSTGEYTRS IFEVSAIALI
ASWFAAVVLI PLLGYHLLPE RKKHAHEAHL PDDHEHDIYD TRFYQRLRGW VDWCIERRFV
VLLITGALFV VALMGFSLVP QQFFPSSDRP ELLVDVRLPE GASFAATLRE TERLEKILDK
RPEIDHSVNF VGSGAPRFYL PLDQQLQLPN FAQFVVTAKS VKDREKLAAW LETTLRDQFP
AVRWRLSRLE NGPPVGYPVQ FRVSGDDIAT VRSIAEKVAA TMRGDARTVN VQFDWDEPAE
RSVRFELDQK KARELNVTSQ DVSSFLAMTL SGTTVTQYRE RDKLIAVDLR APRADRVDPA
KLAGLALPTP NGPVPLGSLG RFTPALEYGV VWERDRQPTI TVQSDVRAGA QGIDVTHTID
GKLNALRTQL PVGYQINIGG SVEESAKAQK SINAQMPLMA IAVFTLLMIQ LQSFSRVLMV
VLTAPLGLIG VVGTLLLFGQ PFGFVAMLGV IAMFGIIMRN SVILVDQIEQ DIAAGHGRLD
AIVGATVRRF RPITLTAAAA VLALIPLLRS NFFGPMATAL MGGITSATVL TLFYLPALYA
AWFRVKRDER DPHEPPHDGT PAAPSGA
|
|---|
| |