| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_1635 |
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| Symbol | |
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| ID | 4311062 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008390 |
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| Strand | + |
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| Start bp | 1809295 |
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| End bp | 1810833 |
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| Gene Length | 1539 bp |
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| Protein Length | 512 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 638149451 |
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| Product | EmrB/QacA family drug resistance transporter |
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| Protein accession | YP_773527 |
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| Protein GI | 115351688 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0545873 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGGGC CGATGCCGGC CGCCGATGGC GGCTTTCGCC CACCGAGCGT CGCGCTGACG
ACGTTCGGTC TCGCGCTCGC TGTCTTCATG CAGGTGCTCG ACGGCACCGT CGCGAACGTA
TCGCTGCCGA CGATCGCCGG CAATTTCGGC GTGAGCACGA CGCAGAGCGC ATGGGTCGTC
ACCACGTTCT CGGTCAGCAT TGCAATCGCG CTGCCGCTGA CCGGCTTTCT CGTCAAGCGC
ATCGGGCAGG TCCGGCTGTT CGTGTGGGCC ACGCTCGCCT TCACGTTCGC GTCGCTGCTG
TGCGGCCTCG CGCAAAACCT GCCGCAGCTC GTCGCGTTCC GCGCGCTGCA GGGCCTGGTG
GCCGGGCCGA TGATCCCCAC CACGCAAGCG TTGATGTTGT CGATCTACCC GCCGCAGCGA
CGCGGCTTCG CGCTGTCGAT GATCGCGATG GTCACCGTCG TCGCGCCGAT CGCGGGCCCC
GTGTTCGGCG GCTGGATCAC CGAGCATTAC TCGTGGCGCT GGGCGTTCCT GATCAATCTG
CCGATCGGCG TGTTCGCCGC GCTCTGCGTC TTCGCGCAGA TGCGTGCGCG CGTCGAAACG
ACCGTCGCCG CGCGCGTCGA CTATGTCAGC CTCGCCGCGC TGGTCGTCGG CGTCGGCGCG
CTGCAGATCG TGCTCGACAA GGGCAACGAG GCCGACTGGT TCAACTCCAC GTTCATCGTC
GTGATGTCGG TGGTCGCCGC ATTCGGCATC GCGCTGTTCC TGATCTGGGA ACTCAACGAA
CCGAATCCGA TCGTGAACCT GCGGCTTTTC GCCCATCGCA ACTTCGCGGC AGGCACGCTG
ACGCTCGTGC TCGCATACTC GGCGTTCTTC GCGGTCAACG TGATCGTCCC GCAATGGTTG
CAGCGCACGC TCGGCTACAC GGCGTTCTGG GCCGGGCTTG CCGTCGCGCC GATGGGCGTG
ATTCCGGTGC TGACGACGCC GTTCATGGGC AAGTACGCGC CGCGCTTCAA CATGCGTGTG
CTCGTGTGCT GCGCATTCGC GATCCTCGGC GCGTCGTCGT TCCTGCGCGC CGGCTTCGTG
CCCGACGTCG ACTTCACGCA CATCGCGCTG ATCCAGTTGC TGCAGGGCCT CGGCCTCGCG
CTGTTCATCA TGCCGATCAA CAGCATCCTG CTGTCCGACC TGAAACCCGA CGAGATCGCC
GCCGGGTCCG GCCTGTCGAC CTTCCTGCGC ACGCTCGGCG CGAGCTTCGC GGTATCGATC
ACGTCGTTCC TGTGGGATCG GCGCGCCGTC CTGCACCACG CGCAACTCAG CGAGCACGTG
AGCGCGTTCG ATCCGGCCGT GCGCGCCGAG GTCGCGCGGC TCGGCGGCGG CGACCCGCAA
CGGGCCGCCG CGCTACTGGG CAATCTGGTC GACGCGCAGG CCTATCAGAT TTCATTCAAC
GACGTTTCAT TCGCGCTCGG CTGCGTCTAT CTCGCCGTAA TGGCGGTGGT ATGGCTCGCC
CGCCCGCCGT TCGGCCCCGG TGCCGGCGCG AAACGATGA
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| Protein sequence | MSGPMPAADG GFRPPSVALT TFGLALAVFM QVLDGTVANV SLPTIAGNFG VSTTQSAWVV
TTFSVSIAIA LPLTGFLVKR IGQVRLFVWA TLAFTFASLL CGLAQNLPQL VAFRALQGLV
AGPMIPTTQA LMLSIYPPQR RGFALSMIAM VTVVAPIAGP VFGGWITEHY SWRWAFLINL
PIGVFAALCV FAQMRARVET TVAARVDYVS LAALVVGVGA LQIVLDKGNE ADWFNSTFIV
VMSVVAAFGI ALFLIWELNE PNPIVNLRLF AHRNFAAGTL TLVLAYSAFF AVNVIVPQWL
QRTLGYTAFW AGLAVAPMGV IPVLTTPFMG KYAPRFNMRV LVCCAFAILG ASSFLRAGFV
PDVDFTHIAL IQLLQGLGLA LFIMPINSIL LSDLKPDEIA AGSGLSTFLR TLGASFAVSI
TSFLWDRRAV LHHAQLSEHV SAFDPAVRAE VARLGGGDPQ RAAALLGNLV DAQAYQISFN
DVSFALGCVY LAVMAVVWLA RPPFGPGAGA KR
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