| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_1633 |
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| Symbol | |
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| ID | 4311060 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008390 |
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| Strand | + |
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| Start bp | 1806428 |
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| End bp | 1807927 |
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| Gene Length | 1500 bp |
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| Protein Length | 499 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 638149449 |
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| Product | RND efflux system outer membrane lipoprotein |
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| Protein accession | YP_773525 |
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| Protein GI | 115351686 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCATGCAG CACTTGCTCC CTGGACGGAC GTTGCGGCCG CGCGGCGCGT CGTGTCGCGA
ATGGCGATCG CGGCAGCGCT CGCGATGCTC GGTGCGTGCG CGAGCCGCGA CGGGCTCACG
CCGGCCGGCA CGCTGCGCGG CGCCGAGTCG CTCGCTGCGA CGCGCAGCCT CGCGCACGCA
TCGACTGCCG ACTGGCCGGC CGCCGACTGG TGGCGTGCGC TGCACGATCC GCAGCTGAGC
GCGCTGATCG ACGAAGCGCT CGCCGGCAAT CCCGATCTCG CCACCGCCGA TGCGCGCGCA
CGTGAAGCGC AGGCGCTGGT GATCGAGGCG CAGGCCGCGC GCGTGCCGCA CGTCGTCGGC
CGCGCGAGCG CGAAGGGCGA GCGCCCGTCC GGCACGCAGT TCTCGACCGG CGAAGGCGGC
GGTTTCTTCA GCCACACGCG CGAGATGAAT CTCGGCTTCA GCTGGGATCT CGATCTGTGG
GGCGGCCGCC GTGCCGCATG GGAAGCCGCG CTCGGCGAAG CGCGTGCCGC GCGGGTCGAC
GCGCGGGCCG CACGCATCAT GCTGTCCGTC AACGTCGCAC GCGCATACGT GAACCTTGCG
TATGCGTTCG ATCAGCAGGA CGTCGCGCGT GCCGAATACG AGCGTGCCGA CGAAGCGCTG
ACACTGACGC GCCAGCGTGT GGCCAAAGGC ATCGACAACG TCGCGCAACA GCGCCAGGCG
GAAAGCGAGG TCGCGGCCGC GGCGCGCGAG CAGGCACGCG CGGCTCAGGC GATCGGCAGC
GCGCGCATCG CCCTCGCGAT CCTGCTCGGC GCGGGCCCCG ACCGCGGCCT TGCGCTCGCG
CGTCCCGCAC CGCTGCCAAT AGCGGCGCTT GCGGTGCCGG CCGATCTGCC CGCCACGTTG
CTCGGCCGGC GCGCCGACAT CGTCGCCGCG CGCTGGCGGG TCGAGGCGGC GAGCCGCAAC
GTCGCCGCCG CCCGCGCGGA CTTCCTGCCC AACGTGAGCC TGACCGCGCT GATCGGGCTG
GCGACACGCG GCGGCGCATC GTTGTTCCAG GCCGCGTCGC GCACCTACAG CGTCGGTCCG
GCCGTGAGCC TGCCGATTTT CGACGGCGGT GAGCGGCGCG GCGTGCTGCG CAAGCGCGAC
GCGCAATACG ACCTGGCGGT CGCCGGCTAC AACAAGACGC TGATCGGTGC GATCGGCGAA
GTGGCCGACG ATCTGCACCG GCTTCATTCG CTCGCCATGC AGGCCGACGC GCAGCAGCGT
GCGCTCGATT CCGTCACCGA CGCGTGGCGG CTCGCGGACG CGCGCTACCG GGCCGGAGTC
GGCAGCTATC TCGATGCGCT CGTCGTGCGC CAGCAGCTAC TGGTCGCGAG CCGCGAGGTC
GCCGCGCTGC GCGCCCAGCG CGCGGATCAA TCGCTGCAGC TCGTCGCGGC ACTGGGCGGC
GGCTTCCGCG CCGAACCCGA CGACGTCGCG CTCGCCGCCA CGCCTTCCCA CCGTCCCTGA
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| Protein sequence | MHAALAPWTD VAAARRVVSR MAIAAALAML GACASRDGLT PAGTLRGAES LAATRSLAHA
STADWPAADW WRALHDPQLS ALIDEALAGN PDLATADARA REAQALVIEA QAARVPHVVG
RASAKGERPS GTQFSTGEGG GFFSHTREMN LGFSWDLDLW GGRRAAWEAA LGEARAARVD
ARAARIMLSV NVARAYVNLA YAFDQQDVAR AEYERADEAL TLTRQRVAKG IDNVAQQRQA
ESEVAAAARE QARAAQAIGS ARIALAILLG AGPDRGLALA RPAPLPIAAL AVPADLPATL
LGRRADIVAA RWRVEAASRN VAAARADFLP NVSLTALIGL ATRGGASLFQ AASRTYSVGP
AVSLPIFDGG ERRGVLRKRD AQYDLAVAGY NKTLIGAIGE VADDLHRLHS LAMQADAQQR
ALDSVTDAWR LADARYRAGV GSYLDALVVR QQLLVASREV AALRAQRADQ SLQLVAALGG
GFRAEPDDVA LAATPSHRP
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