| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_1615 |
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| Symbol | |
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| ID | 4309770 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008390 |
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| Strand | - |
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| Start bp | 1789380 |
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| End bp | 1790087 |
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| Gene Length | 708 bp |
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| Protein Length | 235 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 638149431 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_773507 |
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| Protein GI | 115351668 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCACGT CCAAAGTCAT CATCGTCACC GGCGCATCGC GAGGCATCGG TGCTGAAACG
GTCAACGCAT TCCGCGCCCA GGGCCATCGG GTGGTCGCGA CGTCCCGTTC GATCGGGCCG
TCGGACGATC CCGATCTCGT CACCGTCGCG GGCGACATCG GCGATCCGGC GGTCTCGCGG
CGCGTGGTCG ACACCGCAAT CGAGCGCTTC GGTCGGGTCG ACACCCTCGT CAACAACGCC
GGCGTGTTCA TCGCGAAGCC GTTCACGCAA TACACCGCGG ACGACTATGC GGCCATCACC
CGCGTGAACC TGGACGGCTT CTTCCACGTC ACGCAGCGCG CGATCGCGGC GATACAGCGG
CATGGCGGCG GACACGTGGT CAGCATCACG ACGAGCCTCA TCGACCACGC GAACAGCAAC
GTGCCATCGG TACTCGCATC GCTGACGAAA GGCGGGCTCA ATGCGGCGAC GAAGTCGCTT
GCGATCGAGT ATGCGAAGGC CGGCATCCGC GTGAACGCCG TGTCGCCCGG CATTATCAAC
TCGCCGATGC ATGCGCCCGA CACGCATGCA ACGCTCGCAG CGCTGCATCC GGTCGGCCGG
ATGGGCGAGA TGAGCGACAT CGTCGGCGCG ATCCTGTATC TCGATTCGGC GCCGTTCGTC
ACCGGCGAGA TCCTGCACGT GGACGGCGGC CAGAGCGCCG GGCACTGA
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| Protein sequence | MSTSKVIIVT GASRGIGAET VNAFRAQGHR VVATSRSIGP SDDPDLVTVA GDIGDPAVSR
RVVDTAIERF GRVDTLVNNA GVFIAKPFTQ YTADDYAAIT RVNLDGFFHV TQRAIAAIQR
HGGGHVVSIT TSLIDHANSN VPSVLASLTK GGLNAATKSL AIEYAKAGIR VNAVSPGIIN
SPMHAPDTHA TLAALHPVGR MGEMSDIVGA ILYLDSAPFV TGEILHVDGG QSAGH
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