Gene Bamb_1604 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_1604 
Symbol 
ID4309759 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008390 
Strand
Start bp1779447 
End bp1780904 
Gene Length1458 bp 
Protein Length485 aa 
Translation table11 
GC content67% 
IMG OID638149420 
Productmajor facilitator transporter 
Protein accessionYP_773496 
Protein GI115351657 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACAGCC AATCCCTCGA CCTTGGCGGC ACCGCAGGAG ATCCCGCGTC CGCCGTACCG 
CCCGCGGCCC GGGCCGGCGC CGATGCGACG GCCCTGCCCG CCCGCGCCAT CACGCTCGGC
GAATTCATGG ACGATCTGCC GGTCGGTGCG CTGCACCGGT TCGTCGTCTG GGTGATCGGC
ATCGGGCTGT TCTTCGACAT GTACGAGATC TTCCTCGTCA GCACGATCGG TTCCGCGTTG
CAGAACGAAT ACGGGCTAAG CCGGCAAAGC GCCGATTTCA AGCTGCTGCT GGCATCGGCA
TTCATCGGGA TGTTCGTCGG CGCGATGTGT CTCGGCAGCC TCGCGGACCG CATCGGACGG
CGCAAGGCGT TCCTGATGAC GCTCGTCTGG TACAGCGCGT TTTCGCTGAT CGGCGCGTTC
TCGGTGAATG CCGACATGCT GGTGGCATGC CGATTCCTGA CGGGCATCGG TGTCGGCGCG
ATCTACCCGG TCGCCGACAG CTTTCTGTCG GAAATCCTGC CGAAGGAAAA GCGCGGGCGG
CTCGCCGCGT GGGCCTATAC GACTTCATAC GTCGCGGTGC CGCTGGTCGG CTTCCTCGCG
CTATGGCTGA ACCCGCTTCA CGTCGCGGGC GTGGCCGGCT GGCGCATCAT TCTCGCGATC
GGCAGCCTCG GTGCCGTCTA CGTGCTGCTG ATCCAGCACC GGCTGCCGGA GAGCCCCCGC
TGGCTGCTCG CGCAGGGCCG CACGGCGGAG GCGCATGCCG CGGCGCGGCG CTTCGCGGAG
AGCGCCGGCG TGCGTGCGCC CGAGCAGTTC GCGGCGTCGG TCGAACCGCA GCGGCCGCTG
AGTCTCGGCG AGCGCATCGC GCTGCTGCGC CGCCGGCCCT ACGGCGCGCG CTACCTGATG
CTGGCGGTGT TCCACCTGCT CCAGGGCTTC GGCTATTACG GCTTCGGCAC GCTCGCGGGC
ACGGTCGTCA AGAGCCGCGG TTTCGACGTG ACGGACAGCA CGCTGTTCAT TGCGCTGTCG
TTCATCGGTT ATCCGATCGG CTCGCTGCTG TCGATTCCGT TGCTGAACTG GATCGAGCGA
CGCACGCTCG TGATCGTGTC GATCCTGTCG ATCGCCGCGT TCGGGCTGTG CTTCGCGTAT
TCGGGCAATA CGACGCTGAT CGTCTGCTTC GGTTTCCTGA CGACCTGCGC GTCGAACGTG
TTCAGCAACG CCTATCACGT GTACCAGGCG GAGATTTTCC CGGCGCGCGT ACGCTCGACT
GCGATCGGCA GCACGTACGC CCTGTCGCGC ATCGTCAGCG GCGCGCTGCC GTTCGTGCTG
CTGCCGGTGC TGGTCGCACA CGGCGCGGGT GCGATGTTCG GTGTGATCTC GGTCGCGCTC
GGCATCGTCG CCGTCACGTT GCGCGTGCTC GGGCCGCTGA CCACGCGGCG CAGCCAGGAC
GACATCAACC CGGTATGA
 
Protein sequence
MNSQSLDLGG TAGDPASAVP PAARAGADAT ALPARAITLG EFMDDLPVGA LHRFVVWVIG 
IGLFFDMYEI FLVSTIGSAL QNEYGLSRQS ADFKLLLASA FIGMFVGAMC LGSLADRIGR
RKAFLMTLVW YSAFSLIGAF SVNADMLVAC RFLTGIGVGA IYPVADSFLS EILPKEKRGR
LAAWAYTTSY VAVPLVGFLA LWLNPLHVAG VAGWRIILAI GSLGAVYVLL IQHRLPESPR
WLLAQGRTAE AHAAARRFAE SAGVRAPEQF AASVEPQRPL SLGERIALLR RRPYGARYLM
LAVFHLLQGF GYYGFGTLAG TVVKSRGFDV TDSTLFIALS FIGYPIGSLL SIPLLNWIER
RTLVIVSILS IAAFGLCFAY SGNTTLIVCF GFLTTCASNV FSNAYHVYQA EIFPARVRST
AIGSTYALSR IVSGALPFVL LPVLVAHGAG AMFGVISVAL GIVAVTLRVL GPLTTRRSQD
DINPV