Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_1604 |
Symbol | |
ID | 4309759 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008390 |
Strand | - |
Start bp | 1779447 |
End bp | 1780904 |
Gene Length | 1458 bp |
Protein Length | 485 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 638149420 |
Product | major facilitator transporter |
Protein accession | YP_773496 |
Protein GI | 115351657 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACAGCC AATCCCTCGA CCTTGGCGGC ACCGCAGGAG ATCCCGCGTC CGCCGTACCG CCCGCGGCCC GGGCCGGCGC CGATGCGACG GCCCTGCCCG CCCGCGCCAT CACGCTCGGC GAATTCATGG ACGATCTGCC GGTCGGTGCG CTGCACCGGT TCGTCGTCTG GGTGATCGGC ATCGGGCTGT TCTTCGACAT GTACGAGATC TTCCTCGTCA GCACGATCGG TTCCGCGTTG CAGAACGAAT ACGGGCTAAG CCGGCAAAGC GCCGATTTCA AGCTGCTGCT GGCATCGGCA TTCATCGGGA TGTTCGTCGG CGCGATGTGT CTCGGCAGCC TCGCGGACCG CATCGGACGG CGCAAGGCGT TCCTGATGAC GCTCGTCTGG TACAGCGCGT TTTCGCTGAT CGGCGCGTTC TCGGTGAATG CCGACATGCT GGTGGCATGC CGATTCCTGA CGGGCATCGG TGTCGGCGCG ATCTACCCGG TCGCCGACAG CTTTCTGTCG GAAATCCTGC CGAAGGAAAA GCGCGGGCGG CTCGCCGCGT GGGCCTATAC GACTTCATAC GTCGCGGTGC CGCTGGTCGG CTTCCTCGCG CTATGGCTGA ACCCGCTTCA CGTCGCGGGC GTGGCCGGCT GGCGCATCAT TCTCGCGATC GGCAGCCTCG GTGCCGTCTA CGTGCTGCTG ATCCAGCACC GGCTGCCGGA GAGCCCCCGC TGGCTGCTCG CGCAGGGCCG CACGGCGGAG GCGCATGCCG CGGCGCGGCG CTTCGCGGAG AGCGCCGGCG TGCGTGCGCC CGAGCAGTTC GCGGCGTCGG TCGAACCGCA GCGGCCGCTG AGTCTCGGCG AGCGCATCGC GCTGCTGCGC CGCCGGCCCT ACGGCGCGCG CTACCTGATG CTGGCGGTGT TCCACCTGCT CCAGGGCTTC GGCTATTACG GCTTCGGCAC GCTCGCGGGC ACGGTCGTCA AGAGCCGCGG TTTCGACGTG ACGGACAGCA CGCTGTTCAT TGCGCTGTCG TTCATCGGTT ATCCGATCGG CTCGCTGCTG TCGATTCCGT TGCTGAACTG GATCGAGCGA CGCACGCTCG TGATCGTGTC GATCCTGTCG ATCGCCGCGT TCGGGCTGTG CTTCGCGTAT TCGGGCAATA CGACGCTGAT CGTCTGCTTC GGTTTCCTGA CGACCTGCGC GTCGAACGTG TTCAGCAACG CCTATCACGT GTACCAGGCG GAGATTTTCC CGGCGCGCGT ACGCTCGACT GCGATCGGCA GCACGTACGC CCTGTCGCGC ATCGTCAGCG GCGCGCTGCC GTTCGTGCTG CTGCCGGTGC TGGTCGCACA CGGCGCGGGT GCGATGTTCG GTGTGATCTC GGTCGCGCTC GGCATCGTCG CCGTCACGTT GCGCGTGCTC GGGCCGCTGA CCACGCGGCG CAGCCAGGAC GACATCAACC CGGTATGA
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Protein sequence | MNSQSLDLGG TAGDPASAVP PAARAGADAT ALPARAITLG EFMDDLPVGA LHRFVVWVIG IGLFFDMYEI FLVSTIGSAL QNEYGLSRQS ADFKLLLASA FIGMFVGAMC LGSLADRIGR RKAFLMTLVW YSAFSLIGAF SVNADMLVAC RFLTGIGVGA IYPVADSFLS EILPKEKRGR LAAWAYTTSY VAVPLVGFLA LWLNPLHVAG VAGWRIILAI GSLGAVYVLL IQHRLPESPR WLLAQGRTAE AHAAARRFAE SAGVRAPEQF AASVEPQRPL SLGERIALLR RRPYGARYLM LAVFHLLQGF GYYGFGTLAG TVVKSRGFDV TDSTLFIALS FIGYPIGSLL SIPLLNWIER RTLVIVSILS IAAFGLCFAY SGNTTLIVCF GFLTTCASNV FSNAYHVYQA EIFPARVRST AIGSTYALSR IVSGALPFVL LPVLVAHGAG AMFGVISVAL GIVAVTLRVL GPLTTRRSQD DINPV
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