Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_1583 |
Symbol | |
ID | 4309738 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008390 |
Strand | - |
Start bp | 1751322 |
End bp | 1754189 |
Gene Length | 2868 bp |
Protein Length | 955 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 638149399 |
Product | ATP-dependent transcription regulator LuxR |
Protein accession | YP_773475 |
Protein GI | 115351636 |
COG category | [K] Transcription |
COG ID | [COG2909] ATP-dependent transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.559531 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGTCGGT TGCGTTCGTC ATGCTTCGGA ACCCATGCTA TCGACCAGGC GGCGGCGCGG CCCCACTCGC CGCGGGGGGG ATTGACGCGC GAGCGCGGTT CGACCGATCC TTCCCCCCAC GCCCACCCCG GACGCTGGCC CGCACGGCAT CGCCGGATTC CCACTGCTGC CCCGATGGCC CACCCACCCG ATCGCGCCGA CGCGCCCCCC ACCGAACTCG TGCTGAAGAC GACCGCGCCG CGCGTGCCGG CGCAGTTGCT CGCGCGTGCG CGGCTGAGCC TCGCCGCGCC GGCGTTCGAC GCCCGGCCCG TGATGCTCGT GCAGGCGCCG GCCGGCTACG GCAAGACGTC GCTGCTCGCG CAATGGCGGC GCGAATCACT CGCGCTCGGC CGCGCGGTCG TGTGGCTGTC CGCCGACGAG CGCGACGACG CGCCGCGCCT GCTGCAGGGG CTCGTGCAGG CGGTGCGCAC GGGTTGCGCG CGGCCCGGCT TCGGGCGTCT GATCGCGGGC GGCGCGGCGC GCGCGCTGGA GGGACTCACC GCGTGGCTGG CCGAAGTCGC GCAACTGTCG ATCGACGCGC TGTTGATCGT CGACGACGCG GAGCGGCTGC CGGCCGCCGG CCTCGACGCG CTGACCTATG TGCTGCACAA CGCGCCGCAG AACCTGCGGG TGATCGTCGC GGGCCGGCGC GGGCTCGATC GCGCGGCCGG CGACCTGCTC GCCGGCGGCC AATGCACGCT CGCGGGCCCC GAATGGCTGC GCTTCACGCT CGACGAGACG ATCGCGCTGG TCGGTGCGCG CTTCGCACAG CGGGTCGACG CCGATGCGTG CGCGCGGCTG TTCGAGCGCG TGGACGGCTG GCCGCTCGGG CTGCAGCTCG CGATGGCCGC GATGGCGCGC TCGGCCGATC CGCGCCAGGC CGTCGACGCG CTCGCCGCGC GCATGGACGG TACTCGCGAC CGGCTCGTCG AGCTGCTGCT CGCGAACCTG TCCGCCGACG ACACCGCGTT CCTGACGCGC ACGAGCATCG CCGATCGCCT GCATCCGTCG CTGTGTGCCG CGCTGCTCGA CGATGCGGAG GCGCCCGACC GGCTCGCGCG GCTCGCGCGC GATACGCCGC TGTTCATCGC ATCGGATGAC TCCGACTGGT GCCGGCTGCA TCCGCTCGTG CGCGATACGC TGCGCGACCG TCTGGCGGCG GGCCCGGCCG CGGAGCGCAG CGTGCTGCAT GGACGCGCGG CCGCATGGCT CGATGCGCAC GGGATGACGG AGGAAGCCGC GCGTCATGCG TATGCGGCCG GCCAGGTCGA GACCGCGTAC GCGCTCGCGC AGCGCTGCCT CGAGGATGCG ATCAAGCAGG GCCGAATCAA CGACGTACTC GACTGGCTCG CGCTGCTGCC CGATGCGGAA CTCGACAAGC GTCCGACGCT GCGGATCGCG GTCGCGTGGG CACTGGCGCT GGGCGAGCGC CATGTGGAGG CGCAGCGCCA GATCGCCGGC ATCCTCGCCG ACGCCGCCAC GCCGGCCGCT ATGCGCTACG AATGTGCGCT GATCCTCAGC GCGGCGGCCT ATTACGCGGA CGAAATCGAC CGTTTCGTCG AGCTGTTCGA GCCGTGGGCC GACTTCACGC CGCCTGCGGC GACGTGGCTC GCGCAGATGC ATGCGAACCG CCTGTCGGCG CGCGCGATCA TCGTCGGCGA ACCGGCGCAG GCGCGCCGCT ACCAGCAGGC CGCGCCGCGC GGCGGGACGG CTGCCGGGTT CGGCTACGTC GCGCGCTGGG GCGAGCTGAT CACGGGCCTG AGCTACCTGT GCGAAGGCCA GATCCGGCTC GCGGACGACG CGTTGTCGCC GGCACTCGCG CGCGCGGAAG CCGACCTCGG GCGCCGCCAT CCGCTGACCT GCATGTTGGC GGCGATGTGC GCGGCGATCG CCTACGAGGC CGATCGCGTC GACCAGGCCG CCGCGCTGCT CGCGAACCGG CTCGACGTGC TCGAGCACGC GGGCACGCCC GACACCGTGC TGCTCGGCTA TCGGACGTCC GCGCGCATCG CGCTGCTGCG CGGCGTCGAG CATCGCGCGA TCGACCTGCT CGAGGCGCTC GACGCGCTGG GCGTCGCGCG CCGGCTGCCG CGGCTGTCGG TGGCGAGTCT CGCCGAGCAG GTGCGCATTC ACGCGGCGCG TTATCGCGAG GCGACCTGTC ATGCGCTCGT CGAGCGGATC GATGCGATCG CCGCGGCCGA GTTTCCGTCG CATGGCCCGT TGTGGCGGCG CCCCGTCGTG CTGCTGCAGG CGATCGCGCA TGCGGGCGCC GCGCTTGCCG CGCGCCGCTG GGACGATGCG TGCGCGGCGC TCGACGAAGC GGCCGTGCTG GCCCGCGAGA TGAGTCTCGG GGGCGCGCGC ATCGAGATCA TGGCGCTCGG CGCGTTCGCG CTCGAACAAT CCGGGCACGA CGGCCGCGCG CGGCTCGACG AGGCGATGAA CCTCGCGGAC ATGTTCGGCC TCACGCGCAC GCTCGCCGAT ACGCATCCGG CCGTCGCCGA CTGGGCGCGC CGCATCGGCG ACGAGGCGAT CGAGCGCGAT GCTCCGGCAA GGTCCGCGCA ACCGCAGCCG CGCATCGTGC CGCCCGCGCC GCGCAGCACG GCCAGCCCGC GCGCGGTGCC GAGCGTCGTG CTGACGCCCA AGGAGCGCGC GATTCTCGAG CTGCTCGCGC GCAGCCTGTC GAACAAGGAG ATCGCGGTGG CGCTCGCCGT CGGCGAGGAA ACCGTGAAAT GGCACCTGAA GAACCTGTTC GGCAAGCTCG ACGCCAGCTC ACGCAAGCAC GTCGTGCGCC GCGCGCTGGT GCTCGGGTTG CTCGAAAGCG CGCCTTGA
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Protein sequence | MGRLRSSCFG THAIDQAAAR PHSPRGGLTR ERGSTDPSPH AHPGRWPARH RRIPTAAPMA HPPDRADAPP TELVLKTTAP RVPAQLLARA RLSLAAPAFD ARPVMLVQAP AGYGKTSLLA QWRRESLALG RAVVWLSADE RDDAPRLLQG LVQAVRTGCA RPGFGRLIAG GAARALEGLT AWLAEVAQLS IDALLIVDDA ERLPAAGLDA LTYVLHNAPQ NLRVIVAGRR GLDRAAGDLL AGGQCTLAGP EWLRFTLDET IALVGARFAQ RVDADACARL FERVDGWPLG LQLAMAAMAR SADPRQAVDA LAARMDGTRD RLVELLLANL SADDTAFLTR TSIADRLHPS LCAALLDDAE APDRLARLAR DTPLFIASDD SDWCRLHPLV RDTLRDRLAA GPAAERSVLH GRAAAWLDAH GMTEEAARHA YAAGQVETAY ALAQRCLEDA IKQGRINDVL DWLALLPDAE LDKRPTLRIA VAWALALGER HVEAQRQIAG ILADAATPAA MRYECALILS AAAYYADEID RFVELFEPWA DFTPPAATWL AQMHANRLSA RAIIVGEPAQ ARRYQQAAPR GGTAAGFGYV ARWGELITGL SYLCEGQIRL ADDALSPALA RAEADLGRRH PLTCMLAAMC AAIAYEADRV DQAAALLANR LDVLEHAGTP DTVLLGYRTS ARIALLRGVE HRAIDLLEAL DALGVARRLP RLSVASLAEQ VRIHAARYRE ATCHALVERI DAIAAAEFPS HGPLWRRPVV LLQAIAHAGA ALAARRWDDA CAALDEAAVL AREMSLGGAR IEIMALGAFA LEQSGHDGRA RLDEAMNLAD MFGLTRTLAD THPAVADWAR RIGDEAIERD APARSAQPQP RIVPPAPRST ASPRAVPSVV LTPKERAILE LLARSLSNKE IAVALAVGEE TVKWHLKNLF GKLDASSRKH VVRRALVLGL LESAP
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