| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_1582 |
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| Symbol | |
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| ID | 4309737 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008390 |
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| Strand | - |
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| Start bp | 1749933 |
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| End bp | 1751057 |
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| Gene Length | 1125 bp |
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| Protein Length | 374 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 638149398 |
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| Product | porin |
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| Protein accession | YP_773474 |
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| Protein GI | 115351635 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0636869 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGACGA AACTGGCCGC GCTCGCGGCG CTTGCCGGCT GTTCGGCGCT CGCGCAGGCG
CAATCCTCCG TCACGCTGTA CGGCGTGGTC GACACGGGCC TGCTGTACCA GAGCACGTCG
GCCGCTTCGT TCCGCCCGAA CGCGCCGAAC ACCGGCAAGG TGTTCCGGAT GAAGGACGGC
GGCATCTACT CGAGCTTCTG GGGCATCAAG GGCAGCGAGG ACCTCGGCGG CGGCTACAAG
GTCAACTTCA AGCTGCAGGG TTCGTTCGAC AGCGGCACCG GCCGGCTCCA GCTCAGCGAC
ACGCCGGGCG CCGTCGCGAT CTTCAACCAG ATTGCGTCGC TCGGCGTATC GGGGCCGTTC
GGCACGGTGA CGGCCGGCCG CCAGATCGTG CCGATGATCT ACGCGATGGC CGACACCGAC
GTGCGCAACG CGCAGTTCTT CGGCAGCGTG CTGACCGCGT GGCTCGGCCT GAACACCGCG
GCCGGCTGGC CGGCGACGAG CACCAACGGC GCGATCGGTG CGCTGTACGA CAGCAATGCG
CTCGTCTATC AGTCGCCGAC GTTCGCGGGC GTGTCGCTCG CGCTCGAATA CGCACCCGGC
GGCGTCGCCG GACAGTTTCA GGGCGGCACG CGCGAATCCG TCGTGCTCCG GTATTCGAAC
TACGGGCTCA ATGCATCGGC CGTCTACTAC AACGGCCACG ACACGAATCC GGCACCGGGT
GTCGCGCCGA CCGGCGTCGA CAACAACCGC TTCGTCTACG TCGGCGCGAA ATACACGATC
CGCGATTTCT CGGTGTCGGC GTCGTATGGC AACGGCCGGA ATCCCGCGCA TGCGGACCGC
GTGAACCTCG ACATGCTGTC GGCCGGTGTC GGCTATCGCT TCACGCCCGC GTTGCAGGTC
GCCTCCGCCG TGTACTACCT GAAGGACCGC AACCGCTCCG CGAACCGGTC GACGGCCGTC
GTGCTCACGG CCGACTACAG CCTGTCGAAG CGGACGATGG TCTATGCGCA GGCCGGCCAC
GTGAACAACC GCGGCACGAT GGATCAGATG CTGGTGTACG GGCAGCCGGT CGCGCCCGGG
GTCGGCACGA CGGCCGCGAT GGTCGGGTTG CGGCACAACT TCTGA
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| Protein sequence | MKTKLAALAA LAGCSALAQA QSSVTLYGVV DTGLLYQSTS AASFRPNAPN TGKVFRMKDG
GIYSSFWGIK GSEDLGGGYK VNFKLQGSFD SGTGRLQLSD TPGAVAIFNQ IASLGVSGPF
GTVTAGRQIV PMIYAMADTD VRNAQFFGSV LTAWLGLNTA AGWPATSTNG AIGALYDSNA
LVYQSPTFAG VSLALEYAPG GVAGQFQGGT RESVVLRYSN YGLNASAVYY NGHDTNPAPG
VAPTGVDNNR FVYVGAKYTI RDFSVSASYG NGRNPAHADR VNLDMLSAGV GYRFTPALQV
ASAVYYLKDR NRSANRSTAV VLTADYSLSK RTMVYAQAGH VNNRGTMDQM LVYGQPVAPG
VGTTAAMVGL RHNF
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