Gene Bamb_1580 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_1580 
Symbol 
ID4310240 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008390 
Strand
Start bp1748247 
End bp1748780 
Gene Length534 bp 
Protein Length177 aa 
Translation table11 
GC content70% 
IMG OID638149396 
ProductMarR family transcriptional regulator 
Protein accessionYP_773472 
Protein GI115351633 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0153854 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATCGAG CCGCGCATGC GCTCGCGCAA TGGCGCGTCG AGCGTCCGGA TCTGGATGCG 
TCGTCGATGC TCGTGATGGG ACGGCTGCAG GAAGCCGCGC TCGTGATCGC GCGCGACGGC
CTCAATCCGC TTTTCGCGCG CTACGGGTTG CAGCCGGGCG AATTCGACGT GCTGGCGACG
CTGCGACGCA GCGGCGCGCC GTTCGCGCTG ACGCCGACCG CGCTGTACGA CGCGCTGATG
ATGTCGTCGG GCGGGATGAC CGCACGGATC GACCGGTTGC ACAAGGCCGG TTGGGTCGAG
CGTCTGCCGA ATCCCGCCGA CGGCCGCGGC ACGCTCGTCG CGCTGACGGA CGCGGGCCGC
GCGCTGATCG ACGAGGCGGT GGTCGCGCAC GTCGACAATC AGCGCGCGAT GCTGGCGGTG
CTGTCGCAGG CGGAGCAGAC GCAGTTGTCG GCGCTGCTGG AAAAGCTGCT GGCGGGGTTG
GAGGGAGGGG AGTCGGCGCC GGTAGAAAAG CAGCGGCGCG GATCGTCACG CTGA
 
Protein sequence
MDRAAHALAQ WRVERPDLDA SSMLVMGRLQ EAALVIARDG LNPLFARYGL QPGEFDVLAT 
LRRSGAPFAL TPTALYDALM MSSGGMTARI DRLHKAGWVE RLPNPADGRG TLVALTDAGR
ALIDEAVVAH VDNQRAMLAV LSQAEQTQLS ALLEKLLAGL EGGESAPVEK QRRGSSR