| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_1577 |
|---|
| Symbol | cbiJ |
|---|
| ID | 4310237 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria AMMD |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008390 |
|---|
| Strand | + |
|---|
| Start bp | 1745368 |
|---|
| End bp | 1746108 |
|---|
| Gene Length | 741 bp |
|---|
| Protein Length | 246 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 638149393 |
|---|
| Product | cobalt-precorrin-6x reductase |
|---|
| Protein accession | YP_773469 |
|---|
| Protein GI | 115351630 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG2099] Precorrin-6x reductase |
|---|
| TIGRFAM ID | [TIGR00715] precorrin-6x reductase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.0167988 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGTAC GCATCCTGCT CCTCGGCGGC ACCGGCGATG CGCTGACGAT CGCGCGCACG
CTCGGGCCCG GGCACGTCTA TAGCCTCGCA GGCCTCGGCA AGGTGCCCGA CGACCTGCGC
TGCGACGTGC GTGTCGGCGG TTTCGGCGGA GCGGCGGGGC TTGCCGCCTA TTTGCGCAGT
GCCGGCATCG GTCTCGTGAT CGACGCGACG CATCCGTATG CCGCGCAAAT CAGCGCGAAC
GCAGCGGCCG CCGCGCGCGA CGCGGGCGTG CCGCTGTGGG CGCTGCGTCG CGCGCCATGG
ACGCCACGCC CCGGCGACGA CTGGCGGATG GTCGACGACT GGGCCGGCAT CGAGGCCGCG
CTCGCGCCGT TCCGGCGGCC GCTGTTCACG CTCGGGCGCG AACCGCTCGC GCATCTCGAC
GAGATCCCGC CGCACCAGTT CTGGCTGGTG CGCTGCCTCG ATGCGCATCC CGGCAACGCG
CGCGCGCAGA TCGTCGCGAC GCGCGGACCG TTCACGCTCG ACGGTGAACG CGCGCTGTTC
GCGCTCGCGG GCATCGACGT CGTCGTCAGC AAGAACAGCG GCGGCGCCGC GACCGAGGCC
AAGCTCGACG TCGCGCGCGA ACGACGGCTG CCGGTCGTGA TGCTGCGCCG GCCGCCGCTG
CCCGACGCCG ACCGCGCGTT CGACTCGACC GCCGCGCTGC TCGAGGCGCT CGACGCGCTC
GATCCGGCCG CGCACACGTG A
|
|---|
| Protein sequence | MSVRILLLGG TGDALTIART LGPGHVYSLA GLGKVPDDLR CDVRVGGFGG AAGLAAYLRS
AGIGLVIDAT HPYAAQISAN AAAAARDAGV PLWALRRAPW TPRPGDDWRM VDDWAGIEAA
LAPFRRPLFT LGREPLAHLD EIPPHQFWLV RCLDAHPGNA RAQIVATRGP FTLDGERALF
ALAGIDVVVS KNSGGAATEA KLDVARERRL PVVMLRRPPL PDADRAFDST AALLEALDAL
DPAAHT
|
|---|
| |