Gene Bamb_1576 details

Gene Information

• Locus tag: Bamb_1576
• Symbol: cbiD
• ID: 4310236
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia ambifaria AMMD
• Kingdom: Bacteria
• Replicon accession: NC_008390
• Strand: +
• Start bp: 1744280
• End bp: 1745371
• Gene Length: 1092 bp
• Protein Length: 363 aa
• Translation table: 11
• GC content: 71%
• IMG OID: 638149392
• Product: cobalt-precorrin-6A synthase
• Protein accession: YP_773468
• Protein GI: 115351629
• COG category: [H] Coenzyme transport and metabolism
• COG ID: [COG1903] Cobalamin biosynthesis protein CbiD
• TIGRFAM ID: [TIGR00312] cobalamin biosynthesis protein CbiD

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 0.0770059
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGATGCGCG ACGAAACCCC CGAACGACCG GCGCCGCTGC GGTTCGGCTA TACGACCGGC 
AGCTGCGCGA CCGCGACGTC GCTCGCCGCC GCGCGACTGC TGCTCGCGGG CCACGCGGAC 
GATGCGGTCG AAATCGTGTT GCCGAAGGGG CAGCGCGTGA TGATGCGACT CGAGTTCTGC 
CGGACCACCG CCGACGGCGC CGAGGCCGGC ACCGTCAAGG ACGCCGGCGA CGATCCGGAC 
GTCACGCACG GTGCGCTGGT GTTCGCGCGC GTCGCGCTGT CCGCCGCGCC CGGCGTGCGT 
TTTCATGCGG GGCCGGGCGT CGGCACGGTC ACGCGCGCGG GGCTCACGCT GCCGGTCGGC 
GAACCGGCAA TCAATCCGGT GCCGCGCCAG ATGATGACCA CGCACCTCGA CGCGCTCGCG 
GCCGAATACG GTTACACAGG CGGCTTCGAC GTGACGATCG GCGTGGAGGG CGGCGAGGCG 
CTCGCACTGA AGACGATGAA CCCGCGACTG GGCATCGTCG GCGGATTGTC GATCCTCGGC 
ACGACCGGCA TCGTGCGGCC GTTCTCGTGC TCGGCGTACA TTGCGTCGAT CCACCAGGGC 
ATCGACGTCG CGCGCGCGAA CGGCATCGCG CACATCGCCG CGTGCACCGG CAACACGAGC 
GAGGATGCGA TGCGCGCGCA CTACGGCCTG CCCGACATGG CGCTGATCGA AATGGGCGAT 
TTCGCGGGCG CGGTGCTCAA GCATCTGCGC CGCGCGCCGG TCTCCCGCCT GTCGATGTGC 
GGCGGCTTCG GCAAGCTCAG CAAGCTCGCG GCCGGCCATC TCGACCTGCA CAGCCGCCAT 
TCGAGCATCG ACCTGCCGCT GCTCGCGCAG TGGGCGGCCG AGGCCGGTGC GAGCGACGCG 
CTGCAGGCCG CGATGCGCGC GGCGAACACC AGCCAGGAAG CGCTGAAGCT CGCGCTCGCG 
GACGGCGTGC CGCTCGGCGA CCTCGTCTGT GCGCACGCGC TGCGGGTCGC GCGCGACATC 
GTGCCGGCCT CGGTGGCCGT CGAGATGTTC GCGATCGACC GGCAGGGCCG TTTCGTCGGA 
ACTGCGCGAT GA 

 

Protein sequence

MMRDETPERP APLRFGYTTG SCATATSLAA ARLLLAGHAD DAVEIVLPKG QRVMMRLEFC 
RTTADGAEAG TVKDAGDDPD VTHGALVFAR VALSAAPGVR FHAGPGVGTV TRAGLTLPVG 
EPAINPVPRQ MMTTHLDALA AEYGYTGGFD VTIGVEGGEA LALKTMNPRL GIVGGLSILG 
TTGIVRPFSC SAYIASIHQG IDVARANGIA HIAACTGNTS EDAMRAHYGL PDMALIEMGD 
FAGAVLKHLR RAPVSRLSMC GGFGKLSKLA AGHLDLHSRH SSIDLPLLAQ WAAEAGASDA 
LQAAMRAANT SQEALKLALA DGVPLGDLVC AHALRVARDI VPASVAVEMF AIDRQGRFVG 
TAR