Gene Bamb_1575 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_1575 
Symbol 
ID4310235 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008390 
Strand+ 
Start bp1743048 
End bp1744283 
Gene Length1236 bp 
Protein Length411 aa 
Translation table11 
GC content75% 
IMG OID638149391 
Productprecorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit 
Protein accessionYP_773467 
Protein GI115351628 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2241] Precorrin-6B methylase 1
[COG2242] Precorrin-6B methylase 2 
TIGRFAM ID[TIGR02467] precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit
[TIGR02469] precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.797038 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGGCGT GGCTGACGGT AGTGGGCATC GGCGACGACG GTTACGCGGG GCTCGGGCGC 
AGCGCGCGGC GCGCGCTGCT CGACGCGACG CGGGTCGTCG GCGCGAAGCG GCACCTCGAC 
ATGCTGCCCG CGCGGCTGCG GGCCGCGCGC GAGCCATGGC CGTCGCCGTT CGACGTGTCG 
GGCCTGCTCG CGCGACGCGA CGCGCCCGTC TGCGTGCTGG CAAGCGGCGA CCCGATGCTG 
TTCGGCGTCG GCGCCACGCT CGCGCGCGAG CTATCCCCAG ACGAATGGCG CGTGCTGCCC 
GCCCCGTCGT CGCTGTCGCT GGCGGCCGCA CGGCTCGGCT GGGCGCTGCA GGACGTCGGC 
GCGGTGTCGC TCGTCGGCCG ACCGCTCGCG ACGCTCGTGC GCCACCTGCT GCCGGGCCGG 
CGCCTGTTCG TGCTGAGCGC CGACGGCCGC ACGCCGGCCA CGGTCGCCGC CGAACTCACG 
GCGCGCGGCT TCGGCCCGAC CCGCATCAGC GTGTTCGAAC ATCTCGGTGG CCCGCTCGAG 
CGGCGTCTCG ATGGTCTCGC GCAAGACTGG CCCGTCGCCG AAACCGCCGC GCTCAACCTG 
ATCGCGCTCG ACTGCCGGGC CGGCCCCGAT GCGCCGCGCC GCGCGCTCAC GCCCGGTCTG 
CCCGACGACG CGTACCGCCA CGACGGCCAG CTCACCAAGC GCGACATGCG CGCATTGACG 
CTCGGGCGCC TCGCGCCCGC ACCCGGCGAA CTGTTGTGGG ACGTCGGCGC GGGCAGCGGC 
TCGATCGGCA TCGAATGGAT GCGCGCGCAT CCGTCGTGCC AGACGATCGC GATCGAGTCG 
CATGCGGAGC GTCAGCGCTT CATCGAGCAC AACCGCGACG CGCTCGGCGT GCCGGGGCTG 
CAACTCGTCG CGGGGCGCGC GCCCCACGCG CTCGCGGGGC TCGCCGCGCC GGACGCGATC 
TTCATCGGCG GCGGCGCGAG CGCACCCGGC GTGCTCGATG CATGCTGGTC GGCGCTGAAG 
CCCGGCGGCC GGCTCGTCGC GAACGCGGTC ACGCTGCAGG GCGAACTGGC GCTCGCGGCT 
TGGCGCGACG TGCATGGCGG CACGCTCACG CGCGTGTCGC TCGCGCATGC CGAGCCGCTC 
GGCCGTTTCG ACACGTGGCG GCAGCCGTTG CCGGTCACGC TGTACGACGG GCGCAAGCCC 
GATCCCGCGG CAACGGAATT CACGGGCCCC GCGTGA
 
Protein sequence
MTAWLTVVGI GDDGYAGLGR SARRALLDAT RVVGAKRHLD MLPARLRAAR EPWPSPFDVS 
GLLARRDAPV CVLASGDPML FGVGATLARE LSPDEWRVLP APSSLSLAAA RLGWALQDVG 
AVSLVGRPLA TLVRHLLPGR RLFVLSADGR TPATVAAELT ARGFGPTRIS VFEHLGGPLE 
RRLDGLAQDW PVAETAALNL IALDCRAGPD APRRALTPGL PDDAYRHDGQ LTKRDMRALT 
LGRLAPAPGE LLWDVGAGSG SIGIEWMRAH PSCQTIAIES HAERQRFIEH NRDALGVPGL 
QLVAGRAPHA LAGLAAPDAI FIGGGASAPG VLDACWSALK PGGRLVANAV TLQGELALAA 
WRDVHGGTLT RVSLAHAEPL GRFDTWRQPL PVTLYDGRKP DPAATEFTGP A