Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_1550 |
Symbol | |
ID | 4310210 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008390 |
Strand | + |
Start bp | 1716622 |
End bp | 1717785 |
Gene Length | 1164 bp |
Protein Length | 387 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 638149366 |
Product | amidohydrolase |
Protein accession | YP_773442 |
Protein GI | 115351603 |
COG category | [R] General function prediction only |
COG ID | [COG1473] Metal-dependent amidase/aminoacylase/carboxypeptidase |
TIGRFAM ID | [TIGR01891] amidohydrolase |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.388214 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGACGCACA GCGTGATCCC CGCAGGCCTC GCCGACGAAA TGATCGAGAT CCGGCACCGC ATTCATGCCC ACCCCGAACT GGGCTTCGAG GAATTCGCGA CGAGCGACCT CGTTGCCGAG CAGTTGCAGG CATGGGGCTA CACGGTGCAC CGCGGGCTGG GCGGCACGGG CGTGGTCGCG CAGCTGAAGG TCGGCAACGG CACGCAGCGC CTCGGCCTGC GCGCCGACAT GGACGCGCTG CCGATCCACG AGTCGACCGG CCTGCCGTAC CAGAGCACGA TCCCCGGCAA GATGCACGCG TGCGGTCACG ATGGCCACAC GGCGATGCTG CTCGCGGCCG CGAAGCATCT GGCGCGCGAG CGGCGCTTTT CCGGCACGCT GAACCTGATT TTCCAGCCGG CCGAGGAAGG GCTCGGCGGC GCGAAAAAGA TGCTCGACGA CGGGCTGTTC GAGCAGTTCC CGTGCGATGC GATCTTCGCG ATGCACAACA TGCCGGGCTT CCCCACGGGC AAGTTCGGCT TCCTGGCGGG GCCGTTCATG GCGTCGTCGG ATACCGTGAT CGTCGACGTG CAGGGGCGCG GCGGCCACGG CGCGGTGCCG CACAAGGCGA TCGATTCGGT CGTGGTGTGC GCGCAGATCG TCATCGCGCT GCAGACGATC GTGTCGCGCA ACGTGTCGCC GCTCGACATG GCGATCGTCA CGGTCGGCGC GATCCACGCG GGCGACGCGC CGAACGTGAT TCCCGATCGC GCCCAGATGC GCCTGTCGGT GCGCGCGCTG AAGCCCGAGG TGCGCGACCT GCTCGAGGCG CGCATCAAGG AAGTCGTTCA TGCGCAGGCG GCCGTGTTCG GCGCGACCGC GACGATCGAC TACCAGCGCC GCTATCCGGT GCTCGTCAAC GATGCGCGGA TGACCACGTT CGCACGCGAC GTCGCGCGCG AGTGGGTGGG CGAAGCGAAT CTGATCGACG AGATGGTGCC GCTCACCGGC AGCGAGGATT TCGCGTTCCT GCTCGAGAAG CGGCCGGGCT GCTACCTGAT CATCGGCAAC GGTGACGGCG AGGGCGGCTG CATGGTGCAC AACCCCGGCT ACGACTTCAA CGACGCGGTA CTGCCGACCG GCGCGTCGTA CTGGGTCAAG CTGGCCGAGA CGTTTCTGGT GTGA
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Protein sequence | MTHSVIPAGL ADEMIEIRHR IHAHPELGFE EFATSDLVAE QLQAWGYTVH RGLGGTGVVA QLKVGNGTQR LGLRADMDAL PIHESTGLPY QSTIPGKMHA CGHDGHTAML LAAAKHLARE RRFSGTLNLI FQPAEEGLGG AKKMLDDGLF EQFPCDAIFA MHNMPGFPTG KFGFLAGPFM ASSDTVIVDV QGRGGHGAVP HKAIDSVVVC AQIVIALQTI VSRNVSPLDM AIVTVGAIHA GDAPNVIPDR AQMRLSVRAL KPEVRDLLEA RIKEVVHAQA AVFGATATID YQRRYPVLVN DARMTTFARD VAREWVGEAN LIDEMVPLTG SEDFAFLLEK RPGCYLIIGN GDGEGGCMVH NPGYDFNDAV LPTGASYWVK LAETFLV
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