| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_1529 |
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| Symbol | |
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| ID | 4311789 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008390 |
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| Strand | + |
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| Start bp | 1680959 |
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| End bp | 1681627 |
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| Gene Length | 669 bp |
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| Protein Length | 222 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 638149345 |
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| Product | extracytoplasmic-function sigma-70 factor |
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| Protein accession | YP_773421 |
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| Protein GI | 115351582 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.77026 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAATGG CGGAAGTGCT CGAACGCCCG GCAGCGGCAA TGGCGAACCC GTTCCTCGGC
AGTTATCCGG ACCTGCCGTC GCGCCCCGCG CCGCGTGCGC GTCGTGCCAA GGAACCGCGT
GCGCAGGGCG CGCTGCTCGA CGTGCTGATT GCCCATCGCG CGATGCTCGT CAACGTAGCG
CGCGGCTTCG TCGGCTGCGC GAGCCGCGCC GAGGACGTCG TCCACGACGT GTTCGTGAAG
CTCGTCGAAT TCCCGAACCA GGACGCGGTG CGCCAGCCGG TCGCGTACGT GACGCGGATG
GTGCGCAACG CATCGATCGA CGCGTGCCGC CGGCAAAGCC TCGAGAACGT CTATCACACG
GAAGAGGACG ACGGCTTCGA CGTGCCGTCG CCGGAACCGA CGCCCGAGGC CGCGCTGATG
ACGCGCGACA CGCTGCGCCG CGTATGGGCC GCGCTCGACG ATCTGCCGGC GCGCAGCCGC
GCGGCGTTCG AGATGGTGCG GCTGCGCGAG GAGACGCTGC AGACCGCGGC GCGCGCATTG
AACGTGTCGC AGACGCTGGT GCATTTCATG GTGCGCGACG CGGAGCGGCA CTGCGCGGAG
TGTCTCGACG CGTGCCATCG CGGCGTCGCG TGTCCGGTGT TTCTCGGCGG TCGCGCACGG
CGCCGGTAA
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| Protein sequence | MAMAEVLERP AAAMANPFLG SYPDLPSRPA PRARRAKEPR AQGALLDVLI AHRAMLVNVA
RGFVGCASRA EDVVHDVFVK LVEFPNQDAV RQPVAYVTRM VRNASIDACR RQSLENVYHT
EEDDGFDVPS PEPTPEAALM TRDTLRRVWA ALDDLPARSR AAFEMVRLRE ETLQTAARAL
NVSQTLVHFM VRDAERHCAE CLDACHRGVA CPVFLGGRAR RR
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