| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_1524 |
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| Symbol | |
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| ID | 4311784 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008390 |
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| Strand | + |
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| Start bp | 1675770 |
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| End bp | 1678256 |
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| Gene Length | 2487 bp |
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| Protein Length | 828 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 638149340 |
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| Product | fimbrial biogenesis outer membrane usher protein |
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| Protein accession | YP_773416 |
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| Protein GI | 115351577 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3188] P pilus assembly protein, porin PapC |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCGAATCA GACATTCCTT CCTTTGCGTC TCCGTGCTGG TCGTCGGCAG CCCGAGCCAT
GCGACGGAAT TCAATTCGTC GTTCCTCGAC ATCGACGGCA CGAGCAATGT CGACCTGTCG
CAGTTCTCGC AGCCCGACTT CACGCTGCCG GGCGAGTACA TGCTCGACGT GCAGGTCAAC
GACCTGTTCT ACGGGCTGCA GGCGATCCAG TTCATCGCGC TCGACGCATC CGGCGCGGGC
AAGCCGTGCC TGCCGCCGGA ACTCGTCGCG CGGTTCGGGC TGAAACCGTC GCTCGCGAAG
GACCTGCCGC GCTTGCAGGG CGGCCGTTGC GTCGATCTCG GCGCGATCGA GGGCGCGACC
GTGCGTTACC TGAAGAGCGA CGGACGGCTG AAGATCACGG TTCCGCAGGC CGCGCTCGAA
TTCACCGATT CGACCTACCT GCCGCCGTCG AGCTGGTCCG ACGGGATTGC GGGCGCGATG
CTCGACTATC GCGTGATCGC GAACACGAAC CGCAACTTCG GTTCGGGCGG CGGACAGACG
AATTCGATCC AGGCGTACGG AACGATCGGC GCGAACTGGG ATGCATGGCG CTTTCGCGGC
GACTACCAGG CGCAGTCGAA CGTGGGCAAC ACGGCGTATG CGGACCGCAC GTTCCGCTTC
AGCCGGCTTT ACGCGTTTCG CGCGCTGCCG TCGATCCAGT CGACGGTGAC GTTCGGCGAC
GACTACCTGA GCTCGGACAT TTTCGACACG TTCGCGCTGA CGGGGGCGTC GATCCGCAGC
GACGATCGCA TGCTGCCGCC TTCGCTGCGC GGCTATGCGC CGCTGATCTC GGGCGTCGCG
CGCACCAACG CGACCGTGAC CGTGTCGCAG GTGGGCCGCG TGCTGTACGT GACGCGCGTG
TCGCCGGGCG CGTTCGCGCT GCAGAACATC AACACGAGCG TGCAGGGCAC GCTCGACGTC
ACGGTCGATG AGGAAGACGG CAGCGTGCAG CGCTTCCAGG TGACGACGGC CGCCGTGCCG
TTCCTCGCGC GTACCGGACA GCTGCGCTAC AAGGCTGCCG TCGGCAAGCC GCGGCAGTTC
GGCGGCGCCG GCGTCACGCC GTTCTTCGGG TTCGGCGAAG TCGCGTATGG GTTGCCGTTC
GACGTCACGC TGTACGGCGG CTTCATCGCC GCGTCGGGCT ATACGTCGAT CGCACTGGGC
GTCGGCCGCG ATTTCGGCAC GTTCGGCGCG GTATCGGCCG ATGTCACGCA TGCGCGTGCG
CACCTGTGGT GGAACGGCGC GACGCGCAAC GGCAACTCGT ATCGCATCAA TTATTCGAAG
CACTTCGACG GGCTCGACGC GGACGTGCGC TTCTTCGGTT ATCGCTTCTC CGAACGCGAG
TACACCAACT TCGCGCAGTT CTCGGGCGAC CCGACCGCGT ACGGCCTCGC GAACAGCAAG
CAACGCTACT CGGCGACGAT GTCGAAGCGC TTCGGCGACA CGTCGACGTA TTTCTCGTAC
GACCAGACGA CCTACTGGGC CCGCGCGTCG GAGCAGCGCG TCGGCCTCAC GCTCACGCGC
GCATTCTCGA TCGGGGCATT GCGCAACCTG AACGTCAGCG TGTCGGCGTT CCGCACGCAA
AGCGCGGGCG CGAGCGGCAA CCAGTTCTCG GTGACCGCGA CGCTGCCGAT CGGCGGCCGC
CACACCGTCA CGTCGAACCT GACGACGGGC AGCGGCAGCA CGAGCGCGAA CGCGGGCTAC
ATCTACGACG ATCCGGCCGG CCGCACGTAC CAGATCAACG CGGGCGCCAC CGACGGCCGC
GCGTCGGCGA ACGCGAGCTT CCGTCAGCGC ACGTCGACTT ACCAGTTGAG CGCGCAGGCG
TCGACGCTCG CCAACGCGTA TGCGGCCGCG TCGCTCGAAG TCGACGGCTC GCTCGTCGCG
ACGCAGTACG GCGTGTCCGC GCATGCGAAC GGCAACGCGG GCGATACGCG GCTGCTGGTA
TCGACCGACG GCGTGCCCGA CGTGCCGCTG TCCGGCACGC TCACGCATAC CGACTCGCGC
GGCTATGCGG TGCTCGACGG GATCTCGCCG TACAACGTGT TCGACGCGAC CGTCAACGTC
GAGAAGCTGC CGCTCGAGGT GCAGGTGTCG AACCCGATCC AGCGCATGGT GCTGACCGAC
GGCGCGATCG GCTTCGTGAA GTTCTCCGCC GCGCGCGGCA GCAACCTGTA TCTGACGCTG
ACCGATGCGG CCGGCAAGCC GCTGCCGTTC GGCGCATCCG TGCAGGACGC GGCGAACGGC
AAGGAGCTCG GCATCGTCGG CGAAGCCGGC GCCGCGTTCC TGACCCAGGT GCAGCCGAAA
TCCGCGCTGG TGGTGCGGGC AGGCGAACGC ACGCTGTGCG CGGTGAACGC ACTGCCGAAC
CAGCTTCAAC TCGAAGGCAC GCCGATTCCG GTGACGTGCC AGCCGCCCGG CGAGCCGCAT
GCAGCGGCCG CTCGGGTCGA CCGATGA
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| Protein sequence | MRIRHSFLCV SVLVVGSPSH ATEFNSSFLD IDGTSNVDLS QFSQPDFTLP GEYMLDVQVN
DLFYGLQAIQ FIALDASGAG KPCLPPELVA RFGLKPSLAK DLPRLQGGRC VDLGAIEGAT
VRYLKSDGRL KITVPQAALE FTDSTYLPPS SWSDGIAGAM LDYRVIANTN RNFGSGGGQT
NSIQAYGTIG ANWDAWRFRG DYQAQSNVGN TAYADRTFRF SRLYAFRALP SIQSTVTFGD
DYLSSDIFDT FALTGASIRS DDRMLPPSLR GYAPLISGVA RTNATVTVSQ VGRVLYVTRV
SPGAFALQNI NTSVQGTLDV TVDEEDGSVQ RFQVTTAAVP FLARTGQLRY KAAVGKPRQF
GGAGVTPFFG FGEVAYGLPF DVTLYGGFIA ASGYTSIALG VGRDFGTFGA VSADVTHARA
HLWWNGATRN GNSYRINYSK HFDGLDADVR FFGYRFSERE YTNFAQFSGD PTAYGLANSK
QRYSATMSKR FGDTSTYFSY DQTTYWARAS EQRVGLTLTR AFSIGALRNL NVSVSAFRTQ
SAGASGNQFS VTATLPIGGR HTVTSNLTTG SGSTSANAGY IYDDPAGRTY QINAGATDGR
ASANASFRQR TSTYQLSAQA STLANAYAAA SLEVDGSLVA TQYGVSAHAN GNAGDTRLLV
STDGVPDVPL SGTLTHTDSR GYAVLDGISP YNVFDATVNV EKLPLEVQVS NPIQRMVLTD
GAIGFVKFSA ARGSNLYLTL TDAAGKPLPF GASVQDAANG KELGIVGEAG AAFLTQVQPK
SALVVRAGER TLCAVNALPN QLQLEGTPIP VTCQPPGEPH AAAARVDR
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