| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_1520 |
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| Symbol | |
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| ID | 4311780 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008390 |
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| Strand | + |
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| Start bp | 1668533 |
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| End bp | 1669720 |
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| Gene Length | 1188 bp |
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| Protein Length | 395 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 638149336 |
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| Product | periplasmic multidrug efflux lipoprotein precursor |
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| Protein accession | YP_773412 |
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| Protein GI | 115351573 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATAACA AACGCTCCCT CGCGCGCCGC CTCCGGCTGG CGCCGGTCGC GCTCGCGGCC
ATGCTGGCCG TGGCCGGATG CGGAAAGGGC GACAAGGACA AGGCGCCGGA GGCCATTCAG
AACGCGACGG TCGTGACGGT GCGTCCGACG GCCGTGCCGA TGACCGTCGA ATTGCCGGGC
CGGCTCGACG CGTATCGGCA AGCGCAAGTG CGCGCACGGG TCGCGGGCAT CGTCACCGCG
CGCACTTACG AGGAAGGCCA GGAAGTGAAG CAGGGCGCGG TGCTGTTCCG CATCGATCCC
GCGCCGCTGA AGGCCGCGCG CGATGCCGCG CAGGGTGCGC TCGCGAAGGC GCAGGCCGCC
GCGCTCGCGG CGAGCGACAA GCGCCGCCGT TACGACGACC TGGTGCGCGA CCACGCGGTC
AGCGAGCGCG ATCACACCGA GGCCGTCGCC GACGACACGC GGGCGAAGGC CGACGTCGCG
TCCGCGAAGG CCGAACTCGC ACGCGCGCAG CTGCAGCTCG ACTATGCGAC CGTCACCGCG
CCGATTTCGG GCCGCGCACG ACGCGCGCTC GTCACCGAAG GCGCGCTCGT CGGCCAGGAC
CAGGCGACGC CGCTCACGAC CGTCGAGCAG CTCGATCCGA TCTACGTGAA TTTCTCGCAG
CCGGCAGCCG ACGTCGACGC GTTGCGTCGC GCGGTGAAGA GCGGGCACGC GACGGGGATC
GCGCAGCACG ACGTCACGGT GACGCTGCGG CGCGCCGACG GCACCGCGTA TCCGCTGAAG
GGCAAGCTGC TGTTCAGCGA TCTCGCGGTC GATCCGACCA CCGATACCGT CGCGATGCGC
GCGCTGTTCC CCAACCCCGA ACGCGAGCTG CTGCCGGGCG CGTATGTGCG GATCGCGCTC
GATGCGGCCG TCGACCAGCG GGCGATCCTG GTGCCGCGCG ATGCGTTGCT GCGCACGGCC
GAGCGCACGT CGGTGCGCGT GGTCGGCACG AACGGCAAGG TGAAGGACGT CGAGGTCGTC
GCCGACCAGA TGAGCGGACG CGACTGGCGC ATCACGCGCG GGTTGTCGGG CGGCGAGCGC
GTGATCGTCG ACAACGCCGC GCAGTTCGCG CCCGATACCG CCGTCAAGCC CGTCGAGCAG
GCATCGCCGA CGAAGGCCGC GCAACCGGCG GCCGCCCGTC AAACCTGA
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| Protein sequence | MNNKRSLARR LRLAPVALAA MLAVAGCGKG DKDKAPEAIQ NATVVTVRPT AVPMTVELPG
RLDAYRQAQV RARVAGIVTA RTYEEGQEVK QGAVLFRIDP APLKAARDAA QGALAKAQAA
ALAASDKRRR YDDLVRDHAV SERDHTEAVA DDTRAKADVA SAKAELARAQ LQLDYATVTA
PISGRARRAL VTEGALVGQD QATPLTTVEQ LDPIYVNFSQ PAADVDALRR AVKSGHATGI
AQHDVTVTLR RADGTAYPLK GKLLFSDLAV DPTTDTVAMR ALFPNPEREL LPGAYVRIAL
DAAVDQRAIL VPRDALLRTA ERTSVRVVGT NGKVKDVEVV ADQMSGRDWR ITRGLSGGER
VIVDNAAQFA PDTAVKPVEQ ASPTKAAQPA AARQT
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