Gene Bamb_1519 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_1519 
Symbol 
ID4311779 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008390 
Strand- 
Start bp1667734 
End bp1668381 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content68% 
IMG OID638149335 
ProductTetR family transcriptional regulator 
Protein accessionYP_773411 
Protein GI115351572 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCCGCA AGACCCGGGA AGAATCGCTC GCCATCAAGC ACCGGATCCT CGACGCCGCC 
GAGCTGGTCC TGCTCGAAAA AGGCGTCGCG CAAACCGCGA TGGCGGACCT CGCCGAGGCC 
GCCGGGATGT CGCGGGGCGC CGTCTACGGC CACTACCGCA ACAAGATGGA AGTGTGTCTC 
GCGCTGTGCG ACCGCGCGTT CGCACGGACC TCGGAAGGCT TCGACGCGGT CGACAGCCTG 
CCCGCGTTCG CGACGCTGCG CCGCGCGGCG TCGCACTACC TGCAGCAATG CGGGGAGCCG 
GGCTCGATGC AGCGCGTGCT GGTGATCCTC TATACGAAGT GCGAGCAGAG CGAGGAGAAC 
GGCGCGCTCC AGCGGCGCCG CATGCTGCTC GAGCTGCAGA TGCTGCGCAT CACGAAGGCG 
CTGCTGCGCC GCGCGATCGC GGCCGGCGAA ATCGCCGCCG ATCTCGACGT GCACTTGGCG 
GCCGTCCATC TCGTGTCGCT GCTCGAAGGC GTGTTCGCGT CGATGATCTG GACCAACCGC 
CTGCGCGGCA ATCTGTGGAA CGACGCGGAA GCGATGCTGG ACGCCGGTTT CGACGCCGTC 
AGGACCTCCA GCGCACTGCG CGTGCGCGCG CAAAAATTGC CTGCCTGA
 
Protein sequence
MARKTREESL AIKHRILDAA ELVLLEKGVA QTAMADLAEA AGMSRGAVYG HYRNKMEVCL 
ALCDRAFART SEGFDAVDSL PAFATLRRAA SHYLQQCGEP GSMQRVLVIL YTKCEQSEEN 
GALQRRRMLL ELQMLRITKA LLRRAIAAGE IAADLDVHLA AVHLVSLLEG VFASMIWTNR 
LRGNLWNDAE AMLDAGFDAV RTSSALRVRA QKLPA