Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_1512 |
Symbol | |
ID | 4311772 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008390 |
Strand | + |
Start bp | 1657996 |
End bp | 1659675 |
Gene Length | 1680 bp |
Protein Length | 559 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 638149328 |
Product | SpoVR family protein |
Protein accession | YP_773404 |
Protein GI | 115351565 |
COG category | [S] Function unknown |
COG ID | [COG2719] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.854578 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACGACCC GCCATCTGCA CAACGAGTCG CGCGGCTACG CGCCGCGCCC TTCCGGCGAC GCCACGGCCG GCCCTGCCGC ATCGCAGCAA AGCGGCCGGG TCGAACCGGC GCCGCCGGCC GCCGACTTGC CCGGCTCCGG GCAGAAGGAA GCGCGTATGA ACGTTGCCGA ACGCAAGCCG CTGCCGTGCC CGTCCGACTG GACGTTCGAA CTGCTCGAGG AATACGACAC GCACATCTCG CAGGTCGCCG AGCAATACGA GCTCGATATC TATCCGATCC AGCTCGAACT GATCAGCGCC GAGCAGATGA TGGACGCGTA CGCGTCGGTC GGGATGCCGG TCAACTATCG CCACTGGTCG TTCGGCAAGC ACTTCCTCGC CACCGAAAAG AGCTATCGCC GCGGCCAGAT GGGCCTCGCG TACGAAATCG TCATCAACTC GAACCCGTGC ATCGCGTATC TGATGGAAGA GAACACGATG ACGATGCAGG CGCTCGTCAT CGCGCACGCG GCGTACGGGC ACAACTCCTT CTTCAAGGGC AACTACCTGT TCCGGCTGTG GACCGACGCG CACGCGATCA TCGACTATCT CGTGTACGCG AAGAACTACG TCGCCGAATG CGAGGAGCGC TACGGCCTCG ATCGCGTCGA GGAACTGCTC GATTCGTGCC ATGCGCTGAT GAACTACGGC GTCGACCGCT ACAAGCGGCC GCAGAAACCG TCGCTGTCGA AGGAGGCCGC GCTGCGGCGC GAGCGCGAGG CGTATCTGCA GTCGCAGGTC AACGAGCTGT GGCGCACGCT GCCGGGCAAG AAGCCCGAGC AAATGGAAGA GCAGGAGGAA CGCTATCCGC CGGAGCCGCA GGAGAACCTG CTGTATTTCG CGGAGAAGAA CGCGCCGCTG CTCGAGCCGT GGGAGCGGGA AGTGATCCGC ATCGTGCGCA AGATCGGCCA GTACTTCTAT CCGCAGCGGC AGACGCAGGT GATGAACGAG GGTTGGGCGA CGTTCTGGCA CTACACGCTG CTGAACACGC TGTACAACCA GGGCAAGCTG GAAGACGGCT TCATGATGGA GTTCCTGCAT TCGCACAGCA ACGTGGTCTA TCAGCCGCCC GTCACGAAGC CGTACTACAA CGGGATCAAC CCGTATGCGC TCGGCTTCTC GATGATGAGC GACATCCGGC GGATCTGCGA AGCACCGACG GAAGAGGACT ACAAGTGGTT TCCGGAGATC GCGGGCACCC CGTGGCTGCC GGCGATGCAC TACGCGATGC GCAACTTCAA GGACGAGAGC TTCATCGCGC AGTACCTGTC GCCGAACCTG ATCCGCGAGA TGCGGCTGTT CTCGGTGCTC GACGACGACA TGCGCGATTC GCTCGAGGTG TCGGCGATCC ACGACGAGGC CGGTTATCAA TACGTGCGGC AGGCGTTGTC GCGGCAGTAC GACATCCATC ATCGCGAGCC GAACATCCAG GTCTGGGCCG TGAACACGCG CGGCGACCGC AGCCTCACGC TGCGCCACTT CATGACCGAC AACCGCCATC TGTCGAACGA CAGCGAAGAA GTGCTCAAGC ACATGGCGCG ACTCTGGCAG TTCGACGTGT TCCTGGAAAG CGTCGACGAG GCCGGTACCG TGCGCAAGCG CTACGAGTGC CGCTACGTGC CGCCCGAGGT GCGTATCTGA
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Protein sequence | MTTRHLHNES RGYAPRPSGD ATAGPAASQQ SGRVEPAPPA ADLPGSGQKE ARMNVAERKP LPCPSDWTFE LLEEYDTHIS QVAEQYELDI YPIQLELISA EQMMDAYASV GMPVNYRHWS FGKHFLATEK SYRRGQMGLA YEIVINSNPC IAYLMEENTM TMQALVIAHA AYGHNSFFKG NYLFRLWTDA HAIIDYLVYA KNYVAECEER YGLDRVEELL DSCHALMNYG VDRYKRPQKP SLSKEAALRR EREAYLQSQV NELWRTLPGK KPEQMEEQEE RYPPEPQENL LYFAEKNAPL LEPWEREVIR IVRKIGQYFY PQRQTQVMNE GWATFWHYTL LNTLYNQGKL EDGFMMEFLH SHSNVVYQPP VTKPYYNGIN PYALGFSMMS DIRRICEAPT EEDYKWFPEI AGTPWLPAMH YAMRNFKDES FIAQYLSPNL IREMRLFSVL DDDMRDSLEV SAIHDEAGYQ YVRQALSRQY DIHHREPNIQ VWAVNTRGDR SLTLRHFMTD NRHLSNDSEE VLKHMARLWQ FDVFLESVDE AGTVRKRYEC RYVPPEVRI
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