Gene Bamb_1496 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_1496 
Symbol 
ID4309580 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008390 
Strand
Start bp1639534 
End bp1640181 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content68% 
IMG OID638149312 
ProductLexA repressor 
Protein accessionYP_773388 
Protein GI115351549 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG1974] SOS-response transcriptional repressors (RecA-mediated autopeptidases) 
TIGRFAM ID[TIGR00498] SOS regulatory protein LexA 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCAAAC TCACCGCACG TCAGCAGCAA GTGTTCGACT TGATCCGCCG GGCGATCGAG 
CGCTCCGGTT TCCCGCCCAC GCGCGCCGAG ATCGCGGCCG AGCTGGGTTT CAGCTCGCCG
AACGCGGCCG AGGAACACCT CCGTGCGCTG GCGCGCAAGG GCGTGATCGA GCTCGCCGCC
GGCGCGTCGC GCGGCATTCG CCTGCTCGGC ATCGAAGATG CGCCGCACCA GTTCACGCTG
CCGCACGCCG GCCTGATGCA ACTGTCGCTG CCGCTCGTCG GCCGGGTGGC GGCCGGTAGC
CCGATCCTCG CGCAGGAGCA CATCTCGCAG CATTACGCAT GCGATCCCGC GCTCTTCACG
AGCAAGCCCG ACTACCTGCT GAAGGTGCGC GGCCTGTCGA TGCGCGACGC CGGCATTCTC
GACGGCGACC TCCTCGCCGT GCAGAAGCGC ACGGAAGCGA AGGACGGCCA GATCATCGTC
GCGCGTCTGG GCGACGACGT CACGGTCAAG CGCCTGATGC GCCGGCCCGG CGGCCTCGAG
CTGATCGCCG AGAATCCGGA TTACGAAAAC ATCTTCGTCA AGGCCGGCAG CGCGGAATTC
GCGCTGGAAG GCATCGCCGT CGGGCTGATC CGCTCGGGCG AACTCTGA
 
Protein sequence
MTKLTARQQQ VFDLIRRAIE RSGFPPTRAE IAAELGFSSP NAAEEHLRAL ARKGVIELAA 
GASRGIRLLG IEDAPHQFTL PHAGLMQLSL PLVGRVAAGS PILAQEHISQ HYACDPALFT
SKPDYLLKVR GLSMRDAGIL DGDLLAVQKR TEAKDGQIIV ARLGDDVTVK RLMRRPGGLE
LIAENPDYEN IFVKAGSAEF ALEGIAVGLI RSGEL