Gene Bamb_1458 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_1458 
Symbol 
ID4309909 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008390 
Strand- 
Start bp1607820 
End bp1608416 
Gene Length597 bp 
Protein Length198 aa 
Translation table11 
GC content65% 
IMG OID638149272 
ProductNUDIX hydrolase 
Protein accessionYP_773350 
Protein GI115351511 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1051] ADP-ribose pyrophosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.644739 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCGCGCC CCGGTGATAC ACTCGCATTC ACCTCGTCCC TTCCACTCGA CATGAAATTC 
TGCTCCGTCT GCGGTCACGA CGTCATCGCA CGCATTCCTC CGGGCGATAA CCGCGAGCGC 
TTCATTTGCG ATCACTGCGG CACGATCCAT TACCAGAATC CGCGCAACGT GGTCGGCACG 
GTGCCGGTCT GGGGCGATCA GGTGCTGCTG TGCCGCCGCG CGATCGAACC GCGCTACGGG 
TTCTGGACGC TGCCGGCGGG CTTCATGGAA ATGGGCGAGA CGACGGCCGA GGCCGCCGCG 
CGCGAAACGC TCGAGGAAGC CGGCGCGCGC GTCGAGGTGC AGAACCTGTT CACGCTGCTC 
AACGTGCCGC ACGTGCATCA GGTCCACCTG TTCTACCTGG CGCGGCTCGT CGATCCGGCT 
TACGAGGCCG GCGAGGAAAG CCTCGAGGTC AAGCTGTTCG ACGAAGCCGA CATTCCGTGG 
GACGAAATCG CGTTCCCGAC CGTCAGCCAG ACCCTGCGCT TCTTCTTCGC CGATCGCGCC 
GCCGGCGACT ACGGCGTGCA TACCGGCGAT ATCTTCCGCT CGCTGCGCAA CGGCTGA
 
Protein sequence
MPRPGDTLAF TSSLPLDMKF CSVCGHDVIA RIPPGDNRER FICDHCGTIH YQNPRNVVGT 
VPVWGDQVLL CRRAIEPRYG FWTLPAGFME MGETTAEAAA RETLEEAGAR VEVQNLFTLL 
NVPHVHQVHL FYLARLVDPA YEAGEESLEV KLFDEADIPW DEIAFPTVSQ TLRFFFADRA 
AGDYGVHTGD IFRSLRNG