| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_1455 |
|---|
| Symbol | |
|---|
| ID | 4309906 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria AMMD |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008390 |
|---|
| Strand | - |
|---|
| Start bp | 1604963 |
|---|
| End bp | 1606033 |
|---|
| Gene Length | 1071 bp |
|---|
| Protein Length | 356 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 638149269 |
|---|
| Product | dihydroorotate dehydrogenase 2 |
|---|
| Protein accession | YP_773347 |
|---|
| Protein GI | 115351508 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0167] Dihydroorotate dehydrogenase |
|---|
| TIGRFAM ID | [TIGR01036] dihydroorotate dehydrogenase, subfamily 2 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGTCATTCA TTCCGGCCGT CCGCCCAATT CCCGTGTTCA GTTCCCTCTA TCCGCTGGCC
CGCGCATCCC TGTTCAAGAT GGATGCGGAA GACGCTCACC ACCTCACGCT GCGCGCGCTC
GGCGCGGCCG GCCGCACGGG CCTCGCCTGC GCGCTGTCCG CGCGCGTACC CGATGCGCCG
CGCACCGTGA TGGGGCTCAC GTTCCGCAAC CCGGTCGGCC TCGCCGCCGG CCTCGACAAG
GACGGCGCAG CCATCGACGG CCTCGCGTCG CTCGGCTTCG GCTTCATCGA GGTCGGCACC
GTCACGCCGC GCCCGCAGCC GGGCAATCCG CGCCCGCGGA TGTTCCGCCT GCCGCAGGCC
GACGCGCTGA TCAACCGGAT GGGCTTCAAC AACCACGGCG TCGACCAGTT CGTGAAGAAC
GTCCAGGCGG CCCGCTATCG CGGCATCCTG GGCCTGAACA TCGGCAAGAA CGCCGACACG
CCGATCGAGC GCGCGGCGGA AGACTATCTC TACTGCCTCG AGCGCGTGTA CCCGTTCGCG
AGCTACGTGA CGATCAACAT TTCGTCGCCG AACACGAAGA ACCTGCGCCA GTTGCAGGGC
GCGGGCGAAC TCGACGCGCT GCTCGCTGCA CTGAAGGACA AGCAGCAGCG CCTCGCCGAC
CTGCACGGCA AGCTCGTGCC GCTCGCGCTG AAGATCGCCC CCGATCTCGA CGACGAACAG
GTGAAGGAAA TCGGCGACAC ACTGCTGCGC CACAAGATCG AGGCAGTGAT CGCCACCAAC
ACGACGCTGT CGCGCGCGGC CGTGCAGGGC CTGCCGCATG CGGACGAAGC CGGCGGCCTG
TCGGGCCGCC CGGTGTTCGA CGCGTCGAAC GAAGTGATCC GCAAGCTGCA TGCGGAAGTC
GGCAGCGCGG TGCCGATCAT CGGCGTCGGC GGCATCTTCT CGGGCGAGGA CGCACGCGTG
AAGCTCGCGG CCGGCGCATC GCTCGTCCAG CTGTATACGG GCTTCATCTA TCGCGGCCCG
GCGCTCGTGG CCGAATGCGT GAAGGCCATC GCGCGCGAAC GCACCGCGTA A
|
|---|
| Protein sequence | MSFIPAVRPI PVFSSLYPLA RASLFKMDAE DAHHLTLRAL GAAGRTGLAC ALSARVPDAP
RTVMGLTFRN PVGLAAGLDK DGAAIDGLAS LGFGFIEVGT VTPRPQPGNP RPRMFRLPQA
DALINRMGFN NHGVDQFVKN VQAARYRGIL GLNIGKNADT PIERAAEDYL YCLERVYPFA
SYVTINISSP NTKNLRQLQG AGELDALLAA LKDKQQRLAD LHGKLVPLAL KIAPDLDDEQ
VKEIGDTLLR HKIEAVIATN TTLSRAAVQG LPHADEAGGL SGRPVFDASN EVIRKLHAEV
GSAVPIIGVG GIFSGEDARV KLAAGASLVQ LYTGFIYRGP ALVAECVKAI ARERTA
|
|---|
| |