| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_1433 |
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| Symbol | |
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| ID | 4311533 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008390 |
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| Strand | + |
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| Start bp | 1584364 |
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| End bp | 1585998 |
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| Gene Length | 1635 bp |
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| Protein Length | 544 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 638149246 |
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| Product | type II secretion system protein E |
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| Protein accession | YP_773325 |
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| Protein GI | 115351486 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2804] Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.795188 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAACGG AACACATCGT TCAACGCTGG CAGTCGGAAT CCGAAGCATC GGGCGTTGGC
TTCGCGCAAT ACGTGGAGGG CCTGCTGGGC GCCGATCCGA CGCGGCTCGC ACAAGCGGCC
GCCTGCCTTG GCATCGGCGC AGTCGACGCC GATACGCTGC GCGCGGCGCC GACGCGCTTC
GACCTGCTGC CGCTGCACGA CGCGCTGACC TGGCGCGTGC TGCCGGTCGA GCTCGACGGC
GCGCCGTGCG TCGTCGTCGC CGATCCGTTC GCCCGCCACG TGCGCGACGA GCTGCTTGCG
CGGTTCGGCG TGCGGCCGGT CGAACTGGCC ATGAGTGTGC CGGGCGAAGT CGAGCGGCTG
CTCGGCGACA TCGAGTCGAG CGAGCGGCTG ATGGACGACG TGACGATCGA TACGCAGGGC
GATTCGCTCG CACAGGCGAT CGAGTCGATC TCGCTTGCGA GCATCGCGAA AGACGAGAGC
CCGATCATCA GGCTCGTCAA CACGACGCTC TACGACGCGC TGCAGAGCCG CGCGAGCGAT
ATTCATCTCG AAGCGGTGCC GGACGGTCTG TCGATCCGCT ACCGGATCGA CGGCGTGCTG
CAGTCGATCC GCCACATTCC CGGGCTCGAG GCGGCCGCGC AGACGCTGTC GCGCCTGAAG
GTGCTCGCCG CGCTCGACAT CGCGGAGAAG CGCGTGCCGC AGGACGGCCG TTTCAAGGTC
GTGATGCAGG GCCGCGAGAT CGATTTCCGC GTGTCGATCA TTCCCGGCAC CTATGGCGAA
AACGCGGTGA TGCGCGTGCT CGACAAGTCG CAGCGCGGCG ACAGCGTGAG CCTCGACGTG
CTCGGCTTCG ACGCGCAGAC GGCGCGGCGC GTGCGTGCGC TCGCGCACCG GCCTTACGGT
CTGATGCTCG TGACGGGGCC GACCGGCAGC GGCAAGTCGA CGACGCTGTA CGCGGTGCTG
TCGGAAGTCA ACACGGGCGA CGACAAGATC ATCACGATCG AGGACCCGGT CGAATACGAG
CTGAAGGGCG TGCTGCAGAT CCCGGTCAAC GAGCGCAAGG GCCTCACGTT CGCGCGCGGG
CTGCGCTCGA TCCTGCGGCA CGACCCGGAC ACGGTGATGG TCGGCGAGAT CCGCGACGAG
GAGACCGCGT CGATCGCCGT GCAATCGGCG CTCACCGGCC ACCGCGTGCT GTCGACCGTG
CATGCGAACG ACGGGTTCAG CGTGATCGAC CGCTTCATCT ACATGGGCGT CGAGCCGTCG
ACGTTTCTCG AAGCGCTGAA CGGCGTCGTG TCGCAGCGCC TGGTGCGGCG GATCTGCGCG
CGCTGCGGCG GCACGGCGGC GGACGGCGCC GACCTGAGCG GCGCGGCGCC CGACGAACTG
AAGCGCGTGG TCACGCCCGG CACGGGCTGC GAGACCTGCC GCGGCACCGG CTATCACGGC
CGGATCGGAC TCGCGGAAGT GCTGACGCTC GATGCGGCGA TGAAGGCCGC GCTGCTCGAG
CGCTCGATCG AGAAGCGTGC GCAGGCCCTC GCCGGCAACG CCGACTACCG GTCGATGCGC
GACGCGGGGC TTGCGGCGGT TCGCGCGCGG CTGACGACGT TCCAGGAGGT GCAACGTGCG
ATCGCCGTGG AATAA
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| Protein sequence | MKTEHIVQRW QSESEASGVG FAQYVEGLLG ADPTRLAQAA ACLGIGAVDA DTLRAAPTRF
DLLPLHDALT WRVLPVELDG APCVVVADPF ARHVRDELLA RFGVRPVELA MSVPGEVERL
LGDIESSERL MDDVTIDTQG DSLAQAIESI SLASIAKDES PIIRLVNTTL YDALQSRASD
IHLEAVPDGL SIRYRIDGVL QSIRHIPGLE AAAQTLSRLK VLAALDIAEK RVPQDGRFKV
VMQGREIDFR VSIIPGTYGE NAVMRVLDKS QRGDSVSLDV LGFDAQTARR VRALAHRPYG
LMLVTGPTGS GKSTTLYAVL SEVNTGDDKI ITIEDPVEYE LKGVLQIPVN ERKGLTFARG
LRSILRHDPD TVMVGEIRDE ETASIAVQSA LTGHRVLSTV HANDGFSVID RFIYMGVEPS
TFLEALNGVV SQRLVRRICA RCGGTAADGA DLSGAAPDEL KRVVTPGTGC ETCRGTGYHG
RIGLAEVLTL DAAMKAALLE RSIEKRAQAL AGNADYRSMR DAGLAAVRAR LTTFQEVQRA
IAVE
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