Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_1427 |
Symbol | |
ID | 4311527 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008390 |
Strand | + |
Start bp | 1574467 |
End bp | 1576797 |
Gene Length | 2331 bp |
Protein Length | 776 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 638149240 |
Product | periplasmic sensor signal transduction histidine kinase |
Protein accession | YP_773319 |
Protein GI | 115351480 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.430091 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCTGACT GGCCCCATCG TATCTGGCGA GGTGTGACGT CCGTGCGGCC CACTGCGTGG CTGTTCACCG CCGGCGTTGC GTTGCTGGCG GCGCTCAGCT GTACGCCGGC CGCCGAGACG CTGCTGTCGC CGATCGACCG GTTGTACTGG AATCTGGTCG CGACCCGCGT CGATCACGGC GCGCGCGACG ATGTCGTCGT CGTCTCGATC GACAAGAAAA CGATCGCCGA ACTGGGCGGC GGTGCGAGCT ATGCACGGAC GTCCCATGCG CAGGTGCTCG ATCGTCTCGG CGGCGCATCG AGCGTCGTGC TCGACATGAC GATGTTCGGC TCGACGCCCG GCGACGATGC GCTCGCGGCC GCGATCACGC GGCAAGGGCG CGTCGTGCTG CCTGCCCACG TGTCGCCGGA GAGCACGCGT GCCGACACCG TGCTGCTGCC CGCGCGGCAG TTGCGCGGCG CGGCGGCGGC CGTTGGTCAG CGCAGCGTCG TGCTCGGCAG CGATCATCTG GTGCAAGGCA TCGTGCCGTA CGTGCGGGCG GACAATTCGG ACGACGAGTT CCCGCACGTC GCGCTGCAGG CGATCCGCGT GGCGGGCGCG TCGCTGCCGG CCGGCGACGT GCGTCTCCAG GTACAGGATC ACGTATCCAA GATGGGGCGC GTCGCAGCTC ACTCGCTCGC GCTGTTCCTG CCGGCCCGCT TCGACCTCGA CCGCTATTCG TATGTCGACG TGCTGAAGGG GCGCATCCCG GAGTCGGCGT GGCGCGGCCG CATCGTGTTC ATCGGCGACA CGATGTCGGA TCTTTCCGGC GTGTACGACC TGTCGACGTC GGAAGGTGGA CGGCTGCGGC GCGTCGAAGT CGACGCGATG GTGACGCAGG CGCTGCTCGA CGGCCACATC CTGTGGCGTG AGCCGGTGGC GGTTCAGGTC GTCGTCAGCA TCGCGGTCGC GACGGGGATG CTGCTGATCT GCATGCTGGT GCCGGGCTGG CGCATGTACG CATTCGCGCT CGGGGGGCTG GCCATGTTCG TCGCCGTCGA ACTGGTGCTG CTCGTGCGTT GGTCATGCTG GACGCCGCTC GGGCCGTTGC TTGCCGTGTG CGTATTGATT TTCGCGGTGT GCGGCTGGCG GCGCGCCGGC AGCGTGCGGA CATTCCTGTT GAACGAATAC GGGATGCTGC GCGGGCTTGC CGGCCAGCAC GCGTTCATCG GCTTGCCGCA CGCGGCAGGC GTCGATGCCG CGATGCCGAC GACGGACGAA GTCGAGATTG CGATGCAGAG CATTCGCGCG TGGCAGACGG CCTATGTCGA CATGATTGAA ACGCTGCCGT ATCCCATCTT CGTCGAACAG CACGGCAAGC TGTTGATGTG CAATGCGCGC GGCCGGGCGA TGCTGCAGAC GCTCGACGCG GACGGCGACG CGGACGGCGA TGCGGCCGCA GGGCGCGTGC TGGCGATCGC GCGCGGCGAA GTGCTGACCG CGAAGGCGAC CGGCAAGATC CACTCGGCCG AGCTGGTGCT GAACGGGCGC ACGCAGATGA TGATGGTGAC GCCGTTCGGC GATGGCGACC GGCACAGTTC GACGGCGAGC ATGATCTGTC TCGTCGATAT CCACAACATC AAGGCGGCGG TCGAAAACGA CCGGCTGACG CTGCGGCACA TGGCGCACGA CCTGCGCAAC CCGCTTTCGA CGGTGCTGTC GCTGCTCGAA GCGCACAACC ACGCCGACGG CGCGACCGAC GAGGATTTTC TGGCGGACCT GCACAAGCTC GTCGACTACA GCCTGCGCGT CGCGCAGGAT TTCACGCAGC TGTCGCGCGC CGAACACCTC GATACGCGTG CGTATGTGCC GGTGTCGGCG AACGATCTGG CGGCGGAAGC GGTCGATCAG ATCTGGCACA GCGCGAACGG TAAGCGAATC CGCGTCGAGG GGCCGCATTA CGACGGCGAC GACGTGTTCG TGCTCGGCAA TCGCGACATG CTGTTGCGTG CATTGACCAA CCTGCTCGAC AACGCGATCA AATACTCGGC CGAGGAGACG GCCGTCGACG TCTGGATCGA CGCCGACGAC CGGCAGGTGT CGGTGGCCGT GCAGGACCAG GGGTGCGGCA TCCCGGCCGA CGCGATGCCG AGGCTGTTCG AGCCGTTCTT CCAGGTCGAC GGCACGTATC GCGACGCCAG CCGCGGGGTC GGCCTCGGGC TGCCGTTCGT GAAGGCGGTG ATCGAGCGCC ACGGCGGATC GGTCGACGTG ACGTCGACGC CGGGGCAGGG CAGCCGCTTC ACCGTGCGTT TGCCGAGGAC CGTTGCGGTA ACGACGCTCG ACGACGCGTG A
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Protein sequence | MSDWPHRIWR GVTSVRPTAW LFTAGVALLA ALSCTPAAET LLSPIDRLYW NLVATRVDHG ARDDVVVVSI DKKTIAELGG GASYARTSHA QVLDRLGGAS SVVLDMTMFG STPGDDALAA AITRQGRVVL PAHVSPESTR ADTVLLPARQ LRGAAAAVGQ RSVVLGSDHL VQGIVPYVRA DNSDDEFPHV ALQAIRVAGA SLPAGDVRLQ VQDHVSKMGR VAAHSLALFL PARFDLDRYS YVDVLKGRIP ESAWRGRIVF IGDTMSDLSG VYDLSTSEGG RLRRVEVDAM VTQALLDGHI LWREPVAVQV VVSIAVATGM LLICMLVPGW RMYAFALGGL AMFVAVELVL LVRWSCWTPL GPLLAVCVLI FAVCGWRRAG SVRTFLLNEY GMLRGLAGQH AFIGLPHAAG VDAAMPTTDE VEIAMQSIRA WQTAYVDMIE TLPYPIFVEQ HGKLLMCNAR GRAMLQTLDA DGDADGDAAA GRVLAIARGE VLTAKATGKI HSAELVLNGR TQMMMVTPFG DGDRHSSTAS MICLVDIHNI KAAVENDRLT LRHMAHDLRN PLSTVLSLLE AHNHADGATD EDFLADLHKL VDYSLRVAQD FTQLSRAEHL DTRAYVPVSA NDLAAEAVDQ IWHSANGKRI RVEGPHYDGD DVFVLGNRDM LLRALTNLLD NAIKYSAEET AVDVWIDADD RQVSVAVQDQ GCGIPADAMP RLFEPFFQVD GTYRDASRGV GLGLPFVKAV IERHGGSVDV TSTPGQGSRF TVRLPRTVAV TTLDDA
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