Gene Bamb_1417 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_1417 
Symbol 
ID4311517 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008390 
Strand
Start bp1561372 
End bp1562190 
Gene Length819 bp 
Protein Length272 aa 
Translation table11 
GC content69% 
IMG OID638149228 
ProductTetR family transcriptional regulator 
Protein accessionYP_773309 
Protein GI115351470 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.702279 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAGTAA CTCAGGAGGG ACGATCGTCC GCGGGACGGG CGTCCGGGAC GCGGGCACCC 
GGCAATCGGC AGGCCGGCGG AACGAAGGCG CGCATTCTCG ACGCGGCCGA GGACCTGTTC
ATCGAGCATG GCTTCGAAGC GATGTCGATG CGGCAGATCA CGTCGCGCGC GGCGGTGAAC
CTCGCCGCGG TCAACTACCA CTTCGGCAGC AAGGAAGCGT TGATCCACGC GATGCTGTCG
CGTCGGCTCG ACCAGCTTAA CCAGGAGCGC CTCGGCATCC TCGACCGCTT CGATGCGCAG
CTCGGTGCGC ACATCACCTG CGAGCACGTG CTCGGCGCGA TGTTCATTCC GGCGCTGAAG
GCGTCGCGCG ACCCCGATCG CGGCGGCCCC GCGTTCCTTC GACTGATCGG CCGCGCGTAC
ACCGACCCGT CGCCGTTCGT GCGCAACTTC CTGACCGCGC ACTATGCGAG CGTCGCGGGC
CGCTTCTTCG ATGCGTTCCA GCGCGCGCTG CCGCATCTGC CGCGCACGGA GCTCGGCTGG
CGGCTGCACT TCGCGATCGG CGCGCTGTCC GGCGCGCTGG CCGGTGCCGA AACCGAAAGC
CTGATCGACG AATTCTCGCA ACGCCGCACG ATGAACGACG TGCAGATGAT CGCGCGGCTG
TCCTCGCTGA TCGTCGCCGC GCTGAAGGCG CCGATGCCCG ACAGCACGCA GTTGTCGATC
TTCGCGGCCG TGCTCGACGA TGCGGGCGCG AGCGAGGCGT TCGGGCTGTC GCCGGGTGCG
GCCACGGCCG ATACGGCGAC CGCACATTCG GCGAACTGA
 
Protein sequence
MAVTQEGRSS AGRASGTRAP GNRQAGGTKA RILDAAEDLF IEHGFEAMSM RQITSRAAVN 
LAAVNYHFGS KEALIHAMLS RRLDQLNQER LGILDRFDAQ LGAHITCEHV LGAMFIPALK
ASRDPDRGGP AFLRLIGRAY TDPSPFVRNF LTAHYASVAG RFFDAFQRAL PHLPRTELGW
RLHFAIGALS GALAGAETES LIDEFSQRRT MNDVQMIARL SSLIVAALKA PMPDSTQLSI
FAAVLDDAGA SEAFGLSPGA ATADTATAHS AN