| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_1416 |
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| Symbol | |
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| ID | 4311516 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008390 |
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| Strand | - |
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| Start bp | 1559425 |
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| End bp | 1561179 |
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| Gene Length | 1755 bp |
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| Protein Length | 584 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 638149227 |
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| Product | AMP-dependent synthetase and ligase |
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| Protein accession | YP_773308 |
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| Protein GI | 115351469 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.498039 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCTCAT CCGCAGCAAC CGCAACGACC CAGCTCCCGC CGAACAGCGA CGGCGTCTGG
TACGCGTCGT ATCCGCCCGG CGTGCCGCAC GAGATCGACG TCACGCAATA CACGTCGCTC
GTGCAGTTCT TCGACGAATG CACGACGCGC TTCGCCGAGC GGGTCGCGTA CGTGAGCGCG
GGCGCATCGA TGACTTACCG CACGCTCGCG CAGAAAGTCG ACGCGTTCGC GTCGTATCTG
CAAAGCATGG GCGTAAAGCC CGGCGACCGC GTCGCGATCA TGCTGCCGAA CACGTTCCAG
TATCCGGTCG CGCTGTTCGG CACGCTGAAG GCCGGCGCGA TCGTCGTCAA CGTCAATCCG
CTCTATACCG CGCGCGAACT CGCGCACCAG CTGAAGGACA GCGGCGCGCA GACGATCGTC
GTGTTCGAGA ACTTCGCGCG CACGCTGCAG GAAGCGCTGC CGGAAACGCA GGTGAAGAAC
ATCGTCGTCA CCGCGCTCGG CGACCTGCTC GCCGACGGTT TCAATGCGAA GGGACGCCTG
ATCAACTTCG TGCTGAAGCA TGTGAAGAAG CTGGTGCCTG ACTACAGCCT GCCGCAGGCG
ATCCGGCTGC GCTCCGCCCT CGCGCTCGGC GCGCGCGGCA AACCGCAGCC GGTGCCGACG
ACGCGCGACG ATCTCGCGTT CCTGCAATAC ACCGGCGGCA CGACCGGCGT CGCGAAAGGC
GCGATGCTCA CGCACGGCAA CCTGATCGCG AATCTGCTGC AGGCCAAGGC GTGGATCGCC
GATCAGGTGT CGGGCGACGT CGAGACCGTG CTGACGCCGC TGCCGCTCTA TCACATCTAT
TCGCTGACGG TGAACGCGTT CATCTTCATG GGGCTCGGCG GGCGCAACAT CCTGATCGCG
AACCCGCGCG ACATGAAGAT GGTGATGAAG ATCATCCGCA ACGAAACGTT TACCGGGATC
ACCGGCATCA ACACGCTGTA CAACGCGTTC CTCGACAACG AGGAATTCCG CAAGCGCGAC
TTCTCGCAGC TCAAGCTCGC GATGGCGGGC GGAATGGCGA TGCAGCGCGC GGTCGCGGAG
CGCTTCCAGC AGGTCACGGG CCGGCCCGTC GTCGAAGGCT ACGGGCTCAC CGAATGCTCG
CCGATCGTCA CGATGAATCC GGTGAACCTG AACGACATGG GCGAATTCAG CGGCTCCATC
GGCCTGCCCG CGCCGTCGAC GCTCGTGCGC TTTCGCCGCG AGGACGGCAC CTGGGCCGCC
GTCGGCGAGC CGGGCGAACT GTGCGTGCAC GGGCCGCAGG TGATGCGCGG CTACTGGCAG
CGGCCCGACG AGACCGCGAA GGTGATCGAC GCCGACGGCT GGCTCGCCAC CGGCGACATC
GGCGTGATGG ACGAGCGCGG CTTCATCCGC CTCATCGACC GCAAGAAGGA CATGATCCTC
GTGTCGGGCT TCAACGTGTA CCCGAACGAG ATCGAGGAAG TGCTGGTGAT GCATCCGGGC
ATCAGCGAAG CCGCGGCCAT CGGTATCCCG GACGAAGTCC AGGGCGAACG GATCAAGGTC
TTCGTCGTGC GTCGCGACCC GACGCTGACG GTCGACGACG TGCTCGCGCA CTGCCGCAAG
AACCTGACCG GCTACAAGAT GCCGAAGTTC GTCGAGTTCC GCGACGCGCT GCCGCAGACC
AACGTCGGCA AGATCCTGCG CCGCGCGCTG CGCGACGAGG AGCTCGCCAG GATCAAGGCC
GCGAAACAAG GCTGA
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| Protein sequence | MSSSAATATT QLPPNSDGVW YASYPPGVPH EIDVTQYTSL VQFFDECTTR FAERVAYVSA
GASMTYRTLA QKVDAFASYL QSMGVKPGDR VAIMLPNTFQ YPVALFGTLK AGAIVVNVNP
LYTARELAHQ LKDSGAQTIV VFENFARTLQ EALPETQVKN IVVTALGDLL ADGFNAKGRL
INFVLKHVKK LVPDYSLPQA IRLRSALALG ARGKPQPVPT TRDDLAFLQY TGGTTGVAKG
AMLTHGNLIA NLLQAKAWIA DQVSGDVETV LTPLPLYHIY SLTVNAFIFM GLGGRNILIA
NPRDMKMVMK IIRNETFTGI TGINTLYNAF LDNEEFRKRD FSQLKLAMAG GMAMQRAVAE
RFQQVTGRPV VEGYGLTECS PIVTMNPVNL NDMGEFSGSI GLPAPSTLVR FRREDGTWAA
VGEPGELCVH GPQVMRGYWQ RPDETAKVID ADGWLATGDI GVMDERGFIR LIDRKKDMIL
VSGFNVYPNE IEEVLVMHPG ISEAAAIGIP DEVQGERIKV FVVRRDPTLT VDDVLAHCRK
NLTGYKMPKF VEFRDALPQT NVGKILRRAL RDEELARIKA AKQG
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