| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_1411 |
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| Symbol | |
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| ID | 4311511 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008390 |
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| Strand | + |
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| Start bp | 1555033 |
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| End bp | 1556424 |
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| Gene Length | 1392 bp |
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| Protein Length | 463 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 638149222 |
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| Product | sigma-54 dependent trancsriptional regulator |
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| Protein accession | YP_773303 |
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| Protein GI | 115351464 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGAAACA CGCCCGCAAT CGCAGAACTC GATCTGTACG TCTGGGAAGG CAAGGCGGAC
ATTGTCGACC GCGTTGCCCG CTGCATGGCG AGCTTCGACG TCGAAGTGAT CCGCGCCGAC
AATGCGGAAA TCTCGCCGGA GCGCGCCGCA TTGCGGCCCT CGCTCGCGAT CATCAGCGTG
ACGATGATCG AAACCGGCGC GGCGTTCCTG CGCGACTGGC AAGCCAACAT CGGCATGCCG
GTCGTCTGGG TCGGCGCGGC GCGCGACCAC GACGCATCGC AGTATCCGCC CGACTATTCG
CACATTCTGC CGCTCGACTT CACCTGCGCC GAACTGCGCG GGATGATCGG CAAGCTCGTC
ACGCAGCTGC GCGCGCACGC GGCCGAAACG CTGCAGCCGT CCGAACTCGT CGCGCACTCG
GAGTCGATGC AGGCGCTGCT GCACGAAGTC GACACATTCG CCGACTGCGA CACCAACGTG
CTGCTGCACG GCGAAACCGG TGTCGGCAAG GAGCGCATCG CGCAATTGCT CCACCAGAAG
CATTCGCGCT ATCGCAACGG CGAATTCGTG CCGGTCAACT GCGGTGCGAT CCCCGACGGC
CTGTTCGAAT CGCTGTTCTT CGGGCATGCG AAAGGTTCGT TCACCGGCGC AGTCGTCGCG
CATAAAGGCT ATTTCGAACA GGCGGCGGGC GGCACGCTGT TCCTCGACGA AGTCGGTGAC
CTGCCGTTGT ACCAGCAGGT CAAGCTGTTG CGCGTGCTCG AGGACGGCGC CGTGCTGCGC
GTTGGCGCGA CGTCGCCGAT CAAGGTCGAT TTTCGTCTGG TCGCGGCCAG CAACAAGAAG
CTGCCGCAGC TCGTGAAGGA CGGCCTGTTC CGCGCGGATC TGTACTATCG GCTCGCGGTG
ATCGAGCTGA GCATTCCGTC GCTCGAGGAG CGGGGCGCGG TCGACAAGAT CGCGCTGTTC
AAGTCGTTCG TCGCGGAAGT GGTGGGCGAC GAGCGGCTCG CGCAGCTGTC CGATCTGCCT
TACTGGCTCG CGGACGCGGT CGCGGACAGC TATTTCCCCG GCAACGTGCG CGAACTGCGC
AACCTCGCGG AACGCGTCGG CGTGACGGTG CGGCAGACTG GCGGCTGGGA CGCGGCGCGG
CTGCAGCGGC TGGTCGCGCA TGCGCGCAAC TCGGCGCAGC CGGTGCCGGT GGAAAGCGCG
GCGGAAGTCT TCGTCGACCG AAGCAAGTGG GACATGAACG AGCGCAGCCG CGTGATCGCC
GCCCTCGACG CAAACGGCTG GCGGCGCCAG GATACGGCGC TGCAGCTCGG CATCAGCCGC
AAGGTGTTAT GGGAAAAGAT GCGCAAGTAT CAGATATTCG ACGAAGAGCC CGAGACCCGC
GAAAGCGAAT AA
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| Protein sequence | MRNTPAIAEL DLYVWEGKAD IVDRVARCMA SFDVEVIRAD NAEISPERAA LRPSLAIISV
TMIETGAAFL RDWQANIGMP VVWVGAARDH DASQYPPDYS HILPLDFTCA ELRGMIGKLV
TQLRAHAAET LQPSELVAHS ESMQALLHEV DTFADCDTNV LLHGETGVGK ERIAQLLHQK
HSRYRNGEFV PVNCGAIPDG LFESLFFGHA KGSFTGAVVA HKGYFEQAAG GTLFLDEVGD
LPLYQQVKLL RVLEDGAVLR VGATSPIKVD FRLVAASNKK LPQLVKDGLF RADLYYRLAV
IELSIPSLEE RGAVDKIALF KSFVAEVVGD ERLAQLSDLP YWLADAVADS YFPGNVRELR
NLAERVGVTV RQTGGWDAAR LQRLVAHARN SAQPVPVESA AEVFVDRSKW DMNERSRVIA
ALDANGWRRQ DTALQLGISR KVLWEKMRKY QIFDEEPETR ESE
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