| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_1407 |
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| Symbol | |
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| ID | 4311507 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008390 |
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| Strand | + |
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| Start bp | 1550857 |
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| End bp | 1551870 |
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| Gene Length | 1014 bp |
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| Protein Length | 337 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 638149218 |
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| Product | type II secretion system protein |
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| Protein accession | YP_773299 |
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| Protein GI | 115351460 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2064] Flp pilus assembly protein TadC |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAGCCA ATCAACTTGG TTCGCTCGCA CTGGTGCTTG GGGCGCTGGG CATCCTGTTG
CTGGCGCTGC TCGCGATCCG CAGCGCGCAT GCGCAATCGC GCAGCGGCCG GACACTGACC
GACGCACTCG AGCGGCGGCT TGCAGCGCTG GCGGCCGCGA GCGGGCGGGC GGCCCAGGAT
GCGGACGAAT CGTTGCGGAA GGAGCCGGCC GGCCGGCAGG CACCCGGTCA GCCGTCGCGA
CTCGCGCAAA TGCAGGCACG TCTGTCGGTG TTCGGGATGC GCTGGCTGGA TACCGGTGTC
GGTCGGCTGG TCGTGGCCGA AGAGGATCGG CTGCTGCTCG AGCAATGCGG TTTTGTCGAT
ACGCGCACGC GCGGCTTGTT CCTGAGTGCG CGGATCGCCT GCTCGATCGT CATTCCGCTC
GCATACATCG GCGTGGTCGG GCCGCATGTG AGTGGCACGC AGTGGTGGCT GGGCGTGGGT
ATTTCGTTCA TCGTCGGATT CATGGTGCCG AAGCTCTACC TGAGGCGCCG TGCCGCGAAG
CGTCGACAAG CGGTGACCGA CGAGTTGCCG CTGCTGGTCG ACATGCTGCG TCTGCTTCAA
GGGGTTGGCC TGTCGCTCGA TCAGAGTATT CAGGTCGTCA CCAACGACTT CAAGGGCATG
ATGCCCGTGC TCTCGTCGGA AATGGAAATC GCCCAACGGC AGTTCGCGGC GGGGCGAACA
CGCGAGCAGT CGTTGCAGCG GTTGTCTTCG GGCTTTGAAA ACGAGGATCT GCGCGCCATC
GTGCGATTGC TGATACAGGT CGACAAGCAC GGCGGCGCGG TCCAGGAGCC GCTCAAGCAG
TTCGGCGAGC GCTTGCGCGA GGCCCGTCGC GCGATGCTGC GCGAGCGCAT CGGTCGGTTG
ACGGTCAAGA TGACGGGCGT GATGATCGTG ACGCTTCTGC CCGCGCTGCT GATCGTGACG
GCCGGGCCGG GGATGATTTC GGTGTTGCGT GCGCTGAACC AGGCGCAGCA CTGA
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| Protein sequence | MTANQLGSLA LVLGALGILL LALLAIRSAH AQSRSGRTLT DALERRLAAL AAASGRAAQD
ADESLRKEPA GRQAPGQPSR LAQMQARLSV FGMRWLDTGV GRLVVAEEDR LLLEQCGFVD
TRTRGLFLSA RIACSIVIPL AYIGVVGPHV SGTQWWLGVG ISFIVGFMVP KLYLRRRAAK
RRQAVTDELP LLVDMLRLLQ GVGLSLDQSI QVVTNDFKGM MPVLSSEMEI AQRQFAAGRT
REQSLQRLSS GFENEDLRAI VRLLIQVDKH GGAVQEPLKQ FGERLREARR AMLRERIGRL
TVKMTGVMIV TLLPALLIVT AGPGMISVLR ALNQAQH
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