| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_1403 |
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| Symbol | |
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| ID | 4309627 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008390 |
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| Strand | + |
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| Start bp | 1545863 |
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| End bp | 1547197 |
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| Gene Length | 1335 bp |
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| Protein Length | 444 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 638149214 |
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| Product | type II and III secretion system protein |
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| Protein accession | YP_773295 |
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| Protein GI | 115351456 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4964] Flp pilus assembly protein, secretin CpaC |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAAACA AACTGATTGC ATACGCGATT GCTATCTGGG CCATGACCTT TGGTGTCCTG
ACGGAGGCTG CCGGTACAAA CGCGTCGATT GACCTTGCGG TCGGCTCGCA ACGACAGGTC
GCTGCCGGCC GCACGCTGCA ACGGATCGCG GTTGGCGATC CCGCCGTCGT CGACGTGCTG
GTCATGAAGG GGAGCCATGC CGGATCGGTA CTGCTGGTTG CGAAGGCACC GGGTTCGACG
AACGTGTTGT TGTGGGAGCG GGGCCGCGAC GAGCCGACGG TGTGGAACGT CAATGTCGTC
GATGCGGCCG CTCAGGCGGC ACTGGATGGT TCGGCGCCGA AGGTCAAGGG ATACGGCGGA
GCCGCGGTCC TGTCCGGCTC CTCCGCGTCG CTCGACGCGC ATGAACGGGC CGTGGCCGTC
GGCAAGCGGA TGGGTGGCAA GGACGGCACG GTAATCGATG CGTCGACGGT CGGTAACCGG
AGCGTCGTGC AGGTCGACGT GCGCGTCGTC GAATTCAGCC GCTCGGTGCT GAAGGAAGCG
GGGCTGAACT TCTTCAAGCA GAGCAACGGA TTCGCGTTCG GTGCGTTTTC GCCGGGCGGT
CTTCAGTCCG TGACGGGCGG CGCGACGTCG GCCTTCGCGG CGACGGGCGG CATTCCGATT
GCGTCGGCGT TCAACCTGGT CGTGAATTCC GCCGGCCGCG GCATTTTCGG CAATATTTCG
ATTCTCGAAG CGAACAACCT GGCCCGCGTG CTTGCGCAGC CGACGCTGGT AGCGCTGTCG
GGCCAGAGCG CGAGTTTTCT CGCAGGCGGC GAAATTCCGG TACCGGTGCC GCAGGCACTG
GGCTCGACAG CGATCGACTG GAAGCAGTAC GGCGTTGGTC TCACGCTGAC GCCGACCGTG
CTGAGCCAGC ACCGGATCGC GCTCAAGGTC GCGCCCGAAT CGAGTCAGCT CGACTTTCAG
CACGGCGTGA CGATCAACAG CGTGTCGGTG CCGGCCATCA CGACCCGGCG CGCGGATACG
ACGGTCGAAC TGGGCGATGG CGAGAGCTTC GTGATTGGCG GCCTGATCGA CCGCGAAACG
ATGTCGAACA TCAGCAAGGT GCCGGTCCTG GGCGATCTGC CGATCATCGG TGCGTTCTTC
AAATCGTTGA ATTACCAGCA GAACGACAAG GAGCTGGTGA TCATCGTGAC ACCGCATCTG
GTGGCGCCGA TCGCGAAGGG CGCACCGCTG CCGGCGACGC CGGGTGAGCT GTCCGAGCAG
CGCGACGGGC CTGTCTGGCG CTCGTATCTT GGCGGTATCG CGTCGCCGGA TGCCGCGCCG
GGATTTTCGA AATGA
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| Protein sequence | MTNKLIAYAI AIWAMTFGVL TEAAGTNASI DLAVGSQRQV AAGRTLQRIA VGDPAVVDVL
VMKGSHAGSV LLVAKAPGST NVLLWERGRD EPTVWNVNVV DAAAQAALDG SAPKVKGYGG
AAVLSGSSAS LDAHERAVAV GKRMGGKDGT VIDASTVGNR SVVQVDVRVV EFSRSVLKEA
GLNFFKQSNG FAFGAFSPGG LQSVTGGATS AFAATGGIPI ASAFNLVVNS AGRGIFGNIS
ILEANNLARV LAQPTLVALS GQSASFLAGG EIPVPVPQAL GSTAIDWKQY GVGLTLTPTV
LSQHRIALKV APESSQLDFQ HGVTINSVSV PAITTRRADT TVELGDGESF VIGGLIDRET
MSNISKVPVL GDLPIIGAFF KSLNYQQNDK ELVIIVTPHL VAPIAKGAPL PATPGELSEQ
RDGPVWRSYL GGIASPDAAP GFSK
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