| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_1402 |
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| Symbol | |
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| ID | 4309626 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008390 |
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| Strand | + |
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| Start bp | 1544893 |
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| End bp | 1545798 |
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| Gene Length | 906 bp |
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| Protein Length | 301 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 638149213 |
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| Product | CpaB family Flp pilus assembly protein |
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| Protein accession | YP_773294 |
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| Protein GI | 115351455 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3745] Flp pilus assembly protein CpaB |
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| TIGRFAM ID | [TIGR03177] Flp pilus assembly protein CpaB |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.168447 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCAACA ACTTGACGAA GATCATCGCC GGGCTGCTGA TCGCAATCGC AGTCCTGCTC
GGGATCTATG CATGGACGCT TGGCCGCGCG CCGGCTCATC CGCCGGTTGT GGCAACGCCG
ACCGTCGCGG CGCAATCGGT GCCGCTCGTC GTGGCCGCGC GCGTGCTGCC GGCCGGCCAG
CCGATTCCCG CCGATGCATT GAAGCTGGCA CAGGTGCCGA TGATGCCGAC TGGCGGGTTC
AGCGATCCGA CGGCCCTTGT CGGTCGCGTG CCGGCGAACG ACATTCTTGC CGCAGCGCCG
GTGCTCGAAG GCGCGTTGAC CTCCGGACTG GCCGACCAGG TGGCGCTTGG TGAGCGTGCC
GTCGCCGTGA AGGTCGACGA ATCGAACGCG GTCGGCAACC GGCTGCGGCC CGGCAACTTT
GTCGACGTGT TCCTGAATCT GCGGCGTGAC GGATCCGGCG GCGCCCAAGT GAATTCGGAG
ATTCCCGCTA CGCAGGCGCG CCTGCTGCTG TCGAGGGTCC GTGTGCTGTC GTTCGGCGAT
GCGACCTCCG ATCGCGACGG CGGTGGCGGA CCGGGCGGCG CGGTACGGAC CGCGGTGCTC
GCCGTGCCGA CCGCACAGGT CGATGCGCTC ACGCTCGCCG AGGCAAGCGG TCGTCTGACG
CTCGCGCTGC GCAATCCGCG CGACACCGAA ATCGCGACAC AGACGGTCGC GGTTCGTACG
GGGGGCGGGG GCGCGACGCC GTCGGCGCAG GCCGCGAGCG GCGTATGGCT GGACGACCTG
TCGGGTGGGC GTGCGCGTGC TACACCCCGC GCGCCGGTTG TCCCGCGCGC GCCTGTGATG
GCCCGGGGGA GCGGCAGCAG TATCGAAGTC ATTCGTGGCG GGCGTGCCGA AACGGTTGCC
TATTGA
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| Protein sequence | MANNLTKIIA GLLIAIAVLL GIYAWTLGRA PAHPPVVATP TVAAQSVPLV VAARVLPAGQ
PIPADALKLA QVPMMPTGGF SDPTALVGRV PANDILAAAP VLEGALTSGL ADQVALGERA
VAVKVDESNA VGNRLRPGNF VDVFLNLRRD GSGGAQVNSE IPATQARLLL SRVRVLSFGD
ATSDRDGGGG PGGAVRTAVL AVPTAQVDAL TLAEASGRLT LALRNPRDTE IATQTVAVRT
GGGGATPSAQ AASGVWLDDL SGGRARATPR APVVPRAPVM ARGSGSSIEV IRGGRAETVA
Y
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