Gene Bamb_1388 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_1388 
Symbol 
ID4309612 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008390 
Strand
Start bp1526973 
End bp1527467 
Gene Length495 bp 
Protein Length164 aa 
Translation table11 
GC content65% 
IMG OID638149199 
ProductMarR family transcriptional regulator 
Protein accessionYP_773280 
Protein GI115351441 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGGATT CTCCTTCCCA ACCGCCTGTT TCGCCGCTGT CCTCGTATCA GATGAACGAC 
AGCGTCGGTT ATCTGATGTC GCGTGTGAAA TCGGTGATGA CCAACCTCGT CACGCAGCGC
ACGCAGGAAG AGCTCGGCAT CACCGGCACG CAGGCGAGCA TGCTGTTCAT GATCGCGGTC
GGCAGATGCT CGACGGCCGC CGAGCTCGCG CGGGAATACG GGATCGACGC GAGCGCGGTC
ACGCGCCTGC TCGATCGCGT CGAGAAGCGC GGGCTGCTGT CCCGCGTGCG CAGCATCGAG
GATCGGCGGG TCGTGCGGCT CGAGCTGACC GACGAAGGCC GGGCGCTTGC CGAGCGGCTG
CCGCCGGTGT TCCGCAGCGT GCTCGACGAG CTGCTCGGCG GATTTACGCC GGAAGAAGTC
GGGTTCCTCA AGAGCATGCT GCGCCGCATT CTCAGCAATT ATTGCGAGAA CGCCGGCGGT
GGCGCCCCGC AATAG
 
Protein sequence
MSDSPSQPPV SPLSSYQMND SVGYLMSRVK SVMTNLVTQR TQEELGITGT QASMLFMIAV 
GRCSTAAELA REYGIDASAV TRLLDRVEKR GLLSRVRSIE DRRVVRLELT DEGRALAERL
PPVFRSVLDE LLGGFTPEEV GFLKSMLRRI LSNYCENAGG GAPQ