Gene Bamb_1340 details

Gene Information

• Locus tag: Bamb_1340
• ID: 4311257
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia ambifaria AMMD
• Kingdom: Bacteria
• Replicon accession: NC_008390
• Strand: +
• Start bp: 1472141
• End bp: 1474075
• Gene Length: 1935 bp
• Protein Length: 644 aa
• Translation table: 11
• GC content: 66%
• IMG OID: 638149149
• Product: phospholipid/glycerol acyltransferase
• Protein accession: YP_773232
• Protein GI: 115351393
• COG category: [I] Lipid transport and metabolism
• COG ID: [COG0204] 1-acyl-sn-glycerol-3-phosphate acyltransferase
• TIGRFAM ID: [TIGR00530] 1-acyl-sn-glycerol-3-phosphate acyltransferases

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 0.203495
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGCGATC ACACGCAAGT CTCTTCCGCG TCGCGCGACG AACGGCGCGC CCACGCGTCG 
CAGTTCGATC TGTTGCGCCA GCGCCGTTTC GCACCGTTCT TCACGACCCA GTTCCTGGGC 
GCGCTGAACG ACAACGTGTT CAAGATCGGT TTCACGTCGC TCGTCACTTA TCACACCGCG 
CGCTTCTCCG GCGTCGATGC GAAGACGGCC GCGTTCCTGA TTTCCGCGAT CTTCATTTTG 
CCGTTCGTGC TGTTCTCGGC CACGTCCGGC CAGATCGCCG ACAAATACGA CAAGGCGACG 
CTCACGCGTT TCGTGAAGAC CTTCGAGATC GCGCTGATGC TGGTCGGCGC GGCCGGGTTC 
GTCACGCACA GCGCGACGCT GCTATATCTG TGCACGTTCA TGATGGGGAT GCATTCGACG 
CTGTTCGGCC CCGTCAAGTA TTCGTACCTG CCGCAGCATC TCGGCGAGCA TGAGCTGGTC 
GGCGGCAACG GCCTCGTCGA GATGGGCACG TTCATCGCGA TCCTGATCGG CACGATCATC 
GGCGGCGCGG CCGCGGGCAT CGAAGGCAGC GGCGAGCGCG TGCTGGCCGT CAGCGTGGTC 
GTCATCGCGC TTGCCGGGCG GCTCGTCGCG CAACGCGTGC CGCCGACGCC GGCGCCGCAG 
CCCGATCTCG TGATCAACTG GAACCCGTTC AGCGAGACGT GGCGCAACCT CGGCCTCGCG 
AAGCAGAACC GCACCGTGTT CCTGAGCCTG CTCGGCATCT CGTGGCTGTG GTTCGTCGGC 
GCGACGTTCC TCACGTCGTT CTTCAACTTC GCGAAGGACG TGCTGTCCGC GAGCCCCGAC 
GTCGTCACGG TCCTGCTCGC GACGTTCTCG GTCGGCATCG GCCTCGGCTC GCTGCTGTGC 
GAGCGGTTGT CGCAGCGGCG CGTCGAGATC GGCCTCGTGC CGCTCGGCTC GATCGGCATC 
AGCGTGTTCG CGATCGAACT GTATTTCGCG AGCCGCTCGC TGCCGTCGCC CGGCCATCTG 
CTGTCGGTGG GGGAATTCCT GGCCGGTGGG CGCCACTGGC GCATCCTGGC CGACCTGTTC 
CTGCTCGCGA TGTTCGGCGG TTTCTACAGC GTGCCGCTGT ATGCGCTGAT CCAGAGCCGC 
AGCGCGCCCA CGCACCGTGC GCGAATCATC GCCGCGAACA ACATCCTGAA CGCGCTGTTC 
ATGATCCTGT CGGCCCTGAT GGCGATGGGG CTGACCCACG CCGGCGTCGA TATCCCGGGC 
CTGTTCCTCG TCACCGCGCT GCTGAACGTC GTCGTTGCGA CGTACATCTA CCTGCTCGTT 
CCCGAGTTCC TGCTGCGCTT CGTCGCGTGG GTGCTGGTGC ACACGTTCTA CCGGATTCGC 
CTCGTGCATG CGGAGCGCAT CCCGGCGGAG GGCGCGGCCG TGCTCGTGTG CAACCACGTG 
AGCTACGTCG ATGCGCTCGT GCTGGCCGCC GCAAGCCCGC GGCCGATCCG GTTCGTGATG 
GATCACCGGA TCTTCAAGGC ACGTTTTGCG AGCTGGGTGT TCCGGCATGC GAAGGCGATC 
CCGATCGCGC CGCGCCACGA GGATCCCGAC ATGCTCGCGC GTGCATACGA CGCGTGCGAG 
GCCGCGCTGA AGGACGGCGA ACTCGTGTGC ATCTTCCCCG AAGGCAAGCT GACCAAGACG 
GGCGACATCA ACACGTTCCA CCGCGGTATC ACCGAAATCC TGGGCCGCAC GCCGGCGCCC 
GTGATTCCGA TGGCGCTGCG CGGGCTGTGG GGTAGCTATT TCTCGCGCCA TTCCGATGCG 
CGGATGCCGC GGCCGATCAA GCGCGGCGTG ATGAGCCGCC TGACGCTTGC GGTCGGCGAG 
CCGATGCCGG CGTCGGTCGC CACGCCCGAG GCGCTGCAGG CCGCGGTGAC CGAACTGCGC 
GGCGCGCGCA AGTAA 

 

Protein sequence

MSDHTQVSSA SRDERRAHAS QFDLLRQRRF APFFTTQFLG ALNDNVFKIG FTSLVTYHTA 
RFSGVDAKTA AFLISAIFIL PFVLFSATSG QIADKYDKAT LTRFVKTFEI ALMLVGAAGF 
VTHSATLLYL CTFMMGMHST LFGPVKYSYL PQHLGEHELV GGNGLVEMGT FIAILIGTII 
GGAAAGIEGS GERVLAVSVV VIALAGRLVA QRVPPTPAPQ PDLVINWNPF SETWRNLGLA 
KQNRTVFLSL LGISWLWFVG ATFLTSFFNF AKDVLSASPD VVTVLLATFS VGIGLGSLLC 
ERLSQRRVEI GLVPLGSIGI SVFAIELYFA SRSLPSPGHL LSVGEFLAGG RHWRILADLF 
LLAMFGGFYS VPLYALIQSR SAPTHRARII AANNILNALF MILSALMAMG LTHAGVDIPG 
LFLVTALLNV VVATYIYLLV PEFLLRFVAW VLVHTFYRIR LVHAERIPAE GAAVLVCNHV 
SYVDALVLAA ASPRPIRFVM DHRIFKARFA SWVFRHAKAI PIAPRHEDPD MLARAYDACE 
AALKDGELVC IFPEGKLTKT GDINTFHRGI TEILGRTPAP VIPMALRGLW GSYFSRHSDA 
RMPRPIKRGV MSRLTLAVGE PMPASVATPE ALQAAVTELR GARK