Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_1337 |
Symbol | |
ID | 4311254 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008390 |
Strand | + |
Start bp | 1469718 |
End bp | 1471049 |
Gene Length | 1332 bp |
Protein Length | 443 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 638149146 |
Product | putative ribonuclease BN |
Protein accession | YP_773229 |
Protein GI | 115351390 |
COG category | [S] Function unknown |
COG ID | [COG1295] Predicted membrane protein |
TIGRFAM ID | [TIGR00765] YihY family protein (not ribonuclease BN) |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.500166 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGCCGAAGT TGAGCGTCGA TCTCGACACC ATCAAGCGCC TCGCGCAATT CGCGGCCCGG CGCAGCGCCG AGGATCGCAT CCCGCAAGTG GCGGGCAGCC TCACGTTCAC GACGATGCTG GCACTCGTGC CGCTCGTGAC GGTCGCGTTC GCGCTGTTCA CCGCGTTCCC GATGTTCTCG TCGTTCCAGA TCTCGCTGCA GGGGTTCCTC GCGGACCACC TGATGCCCGC GCAGTTCAAC GTCCAGATCT TCAAGTACCT GAACCAGTTC GCGGCGAAAG CCAAGGGGCT GACGACGGCC GGCCTGATCG TGCTCGTCGT CACGTCGGTG ATGACGATGA TGACGATCGA ATCCGCGTTC AACCTGATCT GGCGCGTGCG CAAGCCGCGG CCGTTCGCGC AGCGCGTGCT CGCGTACTGG GCGCTGATCA CGCTCGGCCC GCTGCTGTTC GGCGTGAGCC TGTCGATTTC GTCGTACCTG TTTACGCAGT CGCTGGCGTT CACCGGCGCC GCGCCGTCGA CCTCGATCGT CGAGTGGCTG CTCGCGCTCG TGTCGCTGCC GCTGACCGTG CTCGCGTTCA CGCTGCTGTA CGTGTACCTG CCGAACTGCA CGGTCGCGTG GCGCGACGCT GTGATCGGCG GGCTGTTCGC AGCCATCGCG TTCGAGCTCG CGAAGCGCGG CTTCGGCTAT TACGTGCGGC GCATTCCGAC CTACACGGCC GTATACGGCG CGTTCGCGGC GCTGCCGGTG TTTCTGCTGT GGGTGTACCT GAGCTGGTTC ATCGCGCTGC TCGGCGCGAT GGTCGCGTCC GCGCTGCCGG CGATCCGCGT CGGCCAGTTC CATCGCATTC GCTATCCGGG CAGCGACCTG CTCGACGCGC TCGAACTGCT CGCGCGGCTG GCCGAGGCGC ACGAGGTCGG CAAGGCGGGC TATACGGCGA CGCGGCTCGC GACCATGTTG CGCTGCGACA TGGAAACCGC GCAGCGGCTG CTGCTGACGA TGGAGGAGCG GGAATGGATC GCGCGGCTGG ATGGCGGTGA AGTCGGGCCG CGCTACATCC TGCTGGCGAA CCCGGCGCAC CTGACGCTCG CGCAGCTGTT CGACGTGCTG GTGATCGACC GCACCGAGCT GACCTACCAG CTGCAGCGGC GCCGCAGCCA CGTCGATGGC GCGGCCTTGC TCGACGTGCT GACGAACGAC CGGTTCGACG TATCGCTCGC GTCGCTGATC GCCGCGCACA GGCTCACAGG TGCACAGCCG GAGGAAAGCG TGCCCGGGCC GGTGCCCGAC GGGGCACCCG ACCCGCACGC GCGGCCGCCG AAAACGGCGT GA
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Protein sequence | MPKLSVDLDT IKRLAQFAAR RSAEDRIPQV AGSLTFTTML ALVPLVTVAF ALFTAFPMFS SFQISLQGFL ADHLMPAQFN VQIFKYLNQF AAKAKGLTTA GLIVLVVTSV MTMMTIESAF NLIWRVRKPR PFAQRVLAYW ALITLGPLLF GVSLSISSYL FTQSLAFTGA APSTSIVEWL LALVSLPLTV LAFTLLYVYL PNCTVAWRDA VIGGLFAAIA FELAKRGFGY YVRRIPTYTA VYGAFAALPV FLLWVYLSWF IALLGAMVAS ALPAIRVGQF HRIRYPGSDL LDALELLARL AEAHEVGKAG YTATRLATML RCDMETAQRL LLTMEEREWI ARLDGGEVGP RYILLANPAH LTLAQLFDVL VIDRTELTYQ LQRRRSHVDG AALLDVLTND RFDVSLASLI AAHRLTGAQP EESVPGPVPD GAPDPHARPP KTA
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