Gene Bamb_1337 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_1337 
Symbol 
ID4311254 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008390 
Strand
Start bp1469718 
End bp1471049 
Gene Length1332 bp 
Protein Length443 aa 
Translation table11 
GC content68% 
IMG OID638149146 
Productputative ribonuclease BN 
Protein accessionYP_773229 
Protein GI115351390 
COG category[S] Function unknown 
COG ID[COG1295] Predicted membrane protein 
TIGRFAM ID[TIGR00765] YihY family protein (not ribonuclease BN) 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.500166 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGCCGAAGT TGAGCGTCGA TCTCGACACC ATCAAGCGCC TCGCGCAATT CGCGGCCCGG 
CGCAGCGCCG AGGATCGCAT CCCGCAAGTG GCGGGCAGCC TCACGTTCAC GACGATGCTG
GCACTCGTGC CGCTCGTGAC GGTCGCGTTC GCGCTGTTCA CCGCGTTCCC GATGTTCTCG
TCGTTCCAGA TCTCGCTGCA GGGGTTCCTC GCGGACCACC TGATGCCCGC GCAGTTCAAC
GTCCAGATCT TCAAGTACCT GAACCAGTTC GCGGCGAAAG CCAAGGGGCT GACGACGGCC
GGCCTGATCG TGCTCGTCGT CACGTCGGTG ATGACGATGA TGACGATCGA ATCCGCGTTC
AACCTGATCT GGCGCGTGCG CAAGCCGCGG CCGTTCGCGC AGCGCGTGCT CGCGTACTGG
GCGCTGATCA CGCTCGGCCC GCTGCTGTTC GGCGTGAGCC TGTCGATTTC GTCGTACCTG
TTTACGCAGT CGCTGGCGTT CACCGGCGCC GCGCCGTCGA CCTCGATCGT CGAGTGGCTG
CTCGCGCTCG TGTCGCTGCC GCTGACCGTG CTCGCGTTCA CGCTGCTGTA CGTGTACCTG
CCGAACTGCA CGGTCGCGTG GCGCGACGCT GTGATCGGCG GGCTGTTCGC AGCCATCGCG
TTCGAGCTCG CGAAGCGCGG CTTCGGCTAT TACGTGCGGC GCATTCCGAC CTACACGGCC
GTATACGGCG CGTTCGCGGC GCTGCCGGTG TTTCTGCTGT GGGTGTACCT GAGCTGGTTC
ATCGCGCTGC TCGGCGCGAT GGTCGCGTCC GCGCTGCCGG CGATCCGCGT CGGCCAGTTC
CATCGCATTC GCTATCCGGG CAGCGACCTG CTCGACGCGC TCGAACTGCT CGCGCGGCTG
GCCGAGGCGC ACGAGGTCGG CAAGGCGGGC TATACGGCGA CGCGGCTCGC GACCATGTTG
CGCTGCGACA TGGAAACCGC GCAGCGGCTG CTGCTGACGA TGGAGGAGCG GGAATGGATC
GCGCGGCTGG ATGGCGGTGA AGTCGGGCCG CGCTACATCC TGCTGGCGAA CCCGGCGCAC
CTGACGCTCG CGCAGCTGTT CGACGTGCTG GTGATCGACC GCACCGAGCT GACCTACCAG
CTGCAGCGGC GCCGCAGCCA CGTCGATGGC GCGGCCTTGC TCGACGTGCT GACGAACGAC
CGGTTCGACG TATCGCTCGC GTCGCTGATC GCCGCGCACA GGCTCACAGG TGCACAGCCG
GAGGAAAGCG TGCCCGGGCC GGTGCCCGAC GGGGCACCCG ACCCGCACGC GCGGCCGCCG
AAAACGGCGT GA
 
Protein sequence
MPKLSVDLDT IKRLAQFAAR RSAEDRIPQV AGSLTFTTML ALVPLVTVAF ALFTAFPMFS 
SFQISLQGFL ADHLMPAQFN VQIFKYLNQF AAKAKGLTTA GLIVLVVTSV MTMMTIESAF
NLIWRVRKPR PFAQRVLAYW ALITLGPLLF GVSLSISSYL FTQSLAFTGA APSTSIVEWL
LALVSLPLTV LAFTLLYVYL PNCTVAWRDA VIGGLFAAIA FELAKRGFGY YVRRIPTYTA
VYGAFAALPV FLLWVYLSWF IALLGAMVAS ALPAIRVGQF HRIRYPGSDL LDALELLARL
AEAHEVGKAG YTATRLATML RCDMETAQRL LLTMEEREWI ARLDGGEVGP RYILLANPAH
LTLAQLFDVL VIDRTELTYQ LQRRRSHVDG AALLDVLTND RFDVSLASLI AAHRLTGAQP
EESVPGPVPD GAPDPHARPP KTA