| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_1331 |
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| Symbol | |
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| ID | 4309040 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008390 |
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| Strand | - |
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| Start bp | 1463201 |
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| End bp | 1464832 |
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| Gene Length | 1632 bp |
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| Protein Length | 543 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 638149140 |
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| Product | RND efflux system outer membrane lipoprotein |
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| Protein accession | YP_773223 |
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| Protein GI | 115351384 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.33262 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCGGTCTC CGGCAACAAA AGGGACGCTG GCACTGGCGG TTCTTGCAGT CTCATTAATA
ATGACCGGCT GCGCGAGCAT GGGCGACAAC AAGCCCAAGT CCACCCGCAT CGAAGCGAAC
GCGCTCGACG CCGGTGCGGC CATCCGCGCG GCCGACCGCG ACGCGGGCTG GCCCGCGTCC
GACTGGTGGC GCGCGTACCG CGATCCGCAG CTCGACGCGT GGATCGCCGC CGCCCAGGCC
GGCAACCCGT CCCTCGCGGC AGCCGAAGCC CGCGTGCGCG AAGCGCAGGC GATGGCGCGC
GTGGCCCGGT CGGCGGAACT GCCTCAGATC AACGGCAACC TGTCGCTGAT GCGCCAGCAC
TGGCCCGACA ACGTCTACTA CGGCCCGGGG CCGCTCGCCG ACACCGACAC GTGGAACAAC
ACCGGCACGC TCGGCCTGTC GTATCACCTC GACCTGTGGG GCAAGGACAA GAACGCGACC
GAGCGCGCGC TCGACACCGC GCATGCGACC GCGGCCGACG CCCGGGCGGC GAAGCTCGAG
CTGGAGGTCA ACGTCGTGCG CGCGTATGTC GGCATGTCGA TGAACTACGC GCTGCTCGAC
CTCGCGCACG AGACGTTCGA ACGCCAGCGC GCGCTGGCCG ATCTCGCGCG CAAGCGTCTG
CAGGCCGGGA TTGGCACGCA GCTCGAAGTC AGCCAGGCCG AATCGACGCT GCCCGACTAC
GAGCGCCAGA TCGACACCTA CGAAGAAGCC ATCCAGCTCG CGCGCCACCA GCTCGCCGCG
CTCGCGGGCA AGGGCCCGGG TGCCGGCGAC GCGATCAAGC GGCCGAGCCT CGCGCTCGAC
GCGCCGGCCG GCCTGCCGTC CGCGATGCCG GCCGACCTGC TCGGCCGCCG CCCGGACGTC
GTCGCGGCCC GCTGGACGGT CGACGCGCAG GCCCGCGGCA TCGATGTCGC GAAAGCCGCG
TTCTACCCGA ACATCGACCT GCTCGCGACG GTCGGCGGCT TCGGCGTGAC CGCGCCGTTC
ACCGACTTCC TGCGCGCGAT GAACGGCGGC TGGACGGCCG GCCCCGCGCT GTCGCTGCCG
ATCTTCGAAG GCGGCCGGCT GCGCGCGCAA CTCGGTGCGG CCGATGCCGG CTACGACCAG
GCGGTCGAGC GTTACAACCA GACGGTCGTC GGCGCGCTGA AGGACATCGC CGACCAGGTC
GTGCGGATCC GCTCGCTCGA TACGCAGAAG AAGGACGCCG CGCGCTCGGT GGCCGCCAAC
GACCGCAGCT ACCAGCTGTC GCGCGAAGGC TTCCGCCGCG GGCTGACCGA TTACGTGAAC
GTGCTGATCG CGCAACAGCA GCTGCTGCGC GCGCAGGAGA CGGCGGCCCG CATCGACGCG
GAACGCCTCG CCGCGCACGC GCAGCTGATG GCCGCGCTCG GCGGCGGCGT CGAAACGGGC
GAGGACGGAC GGGACGGCCA TCCGTGGGAC GGCCATCCGT CGGGCGACCA TCCGTCGCGC
GACGAAGCCG CCGCGGGTGC CGCCGCGCCG GCGGCCGCAT CGGGTGCGAA GCCCGTCGCG
GCTATTGCCC GGCCTGCCCG GCCCGCGCAG GTCGCGACGG CCGGCGCGAG CGCCACGCCG
GCCGCACGGT AA
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| Protein sequence | MRSPATKGTL ALAVLAVSLI MTGCASMGDN KPKSTRIEAN ALDAGAAIRA ADRDAGWPAS
DWWRAYRDPQ LDAWIAAAQA GNPSLAAAEA RVREAQAMAR VARSAELPQI NGNLSLMRQH
WPDNVYYGPG PLADTDTWNN TGTLGLSYHL DLWGKDKNAT ERALDTAHAT AADARAAKLE
LEVNVVRAYV GMSMNYALLD LAHETFERQR ALADLARKRL QAGIGTQLEV SQAESTLPDY
ERQIDTYEEA IQLARHQLAA LAGKGPGAGD AIKRPSLALD APAGLPSAMP ADLLGRRPDV
VAARWTVDAQ ARGIDVAKAA FYPNIDLLAT VGGFGVTAPF TDFLRAMNGG WTAGPALSLP
IFEGGRLRAQ LGAADAGYDQ AVERYNQTVV GALKDIADQV VRIRSLDTQK KDAARSVAAN
DRSYQLSREG FRRGLTDYVN VLIAQQQLLR AQETAARIDA ERLAAHAQLM AALGGGVETG
EDGRDGHPWD GHPSGDHPSR DEAAAGAAAP AAASGAKPVA AIARPARPAQ VATAGASATP
AAR
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