| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_1327 |
|---|
| Symbol | |
|---|
| ID | 4309036 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria AMMD |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008390 |
|---|
| Strand | + |
|---|
| Start bp | 1458198 |
|---|
| End bp | 1459874 |
|---|
| Gene Length | 1677 bp |
|---|
| Protein Length | 558 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 638149136 |
|---|
| Product | methyl-accepting chemotaxis sensory transducer |
|---|
| Protein accession | YP_773219 |
|---|
| Protein GI | 115351380 |
|---|
| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGCAG CATCATTGCA TCCACGGCCG GGTGCGGCCA CCAGCGCATC TGGTGCAGCC
GCCAGGCCCG CCGCCGCACG ACGTCCGCGC GCAGCCCGGC GCGAACGCCG GCCCTGGACG
GTCAAGGCGA CGTTGCGCGC GGCGTTCGCG ATCCTGCTGG CCGGCACGCT CGCGATCGGC
GTGTTTTCGC TATGGCAGAT CAGCCGGCTG AACGCGTCGA TCGCGTCGGT CTACGAGCAG
GGGCACGTGG CGAGCCGCGC GGCGGAGGAA GTGCGCGCCG AGGTGCTGCG TGCGAGCCGC
GCGCAGAAGA TGCTGCTGAC CGCGACCACC GCGAAGGAGC GCGACGACCT GGGCGCCGAG
GTTCGCGCGG GGCTCGCGTC GATCGGCCAG GCGCTCGCGA CGCTGCAGCA TTACGCGGAT
CCGGCCGATG CGGACGATTC CGCGCGCCTG CGCGCGTTCT CCATGGCGGT CGGCACGTGG
AGCGGCCATC TGCGCGATTT CGTCGCGCTC GTGCAGGCGC AGCCGCTCGA CCTGTCGCAG
ATGAACTGGC AGGTCGGCAC GCAGGACGTG TCGCTGCTGG TCGAGACCGC CAAGCTCGAG
AAGCTGGTCG CCATGCTCGT GAAGACGCGC GGCGCGAAGT CGAAGGCGAC GCTCGATGCG
TCCGCAACGA TCTTCTCGTC GTCGTTCGCG ATGATCGCGG CGATGACGGC CGCGCTGTTC
GTGCTGGCGA TCGTGATCGC CGAACAGGTC GTGCGCCGCC TCGCGTCGCA GCTCGGCGGC
GAGCCCGCCG ATGCGAAGGC GATCGCCGCC GACATCGCGC GCGGCGACCT CACGCGGCCG
ATCCCGCTTG GCCGCCACGA CCGCGACAGC ATGGTGCGTG CGCTGTCCGA CATGCAGACC
GGGCTCGCGG CGACCGTCGG CGAGATCGCA GTCAGCGCCG AGGCGATCGC GGCTGCGTCC
GGCGAGATCT CGACCGGCAA TCTCGACCTG TCGCGGCGTA CCGAGCAGCA GGCCGTCGCG
CTCGAGCGCA CCGCGGCCAG CATGGAGGAG CTCACGTCGA CCGTGCGGCA GAACGCCGAA
AACGCGCGGC AGGCGAGCGC GCTCGCGGCC AATGCATCGG CGGTCGCGGA AGCCGGCGGC
GAAGTCGTCG GGCGCGTGGT TGCGACGATG AGCGAGATCG ACGACAGCGC GAAGAACATC
CGCGACATCA TCGGCACGAT CGAGGGAATC GCGTTCCAGA CCAACATCCT CGCGTTGAAC
GCGGCGGTCG AGGCGGCGCG CGCGGGCGAG CAGGGCCGTG GTTTTTCGGT GGTTGCGGGC
GAGGTGCGGC TGCTCGCGCA GCGCGCGGCG AGCGCGGCGA AGGAGATCCG TACGCTGATC
GGCGCGTCGG TCGAGCGCGT CGCGAACGGC GCGGCGCTCG CGCACGATGC GGGTCGCACG
ATGGACGACG TGGTGCGGGC GGTCAAGCGC GTGACTGACA TCATCGGCGA AATCTCCGCG
GCGTCGGACG AGCAGAGCGC CGGGATCGAC GAGATCGGCC GCGCGGTCAT GCAGATGGAT
TCCGGCACCC AGCAGAACGC GGCGCTCGTC GAACAGGCGG CCGCCGCGGC GAATGCGCTC
GACGAGCAGG CGCAGGCGCT CAAGTCGCTG GTCGGGCGCT TTCGCGTCGC GGCGTAA
|
|---|
| Protein sequence | MKAASLHPRP GAATSASGAA ARPAAARRPR AARRERRPWT VKATLRAAFA ILLAGTLAIG
VFSLWQISRL NASIASVYEQ GHVASRAAEE VRAEVLRASR AQKMLLTATT AKERDDLGAE
VRAGLASIGQ ALATLQHYAD PADADDSARL RAFSMAVGTW SGHLRDFVAL VQAQPLDLSQ
MNWQVGTQDV SLLVETAKLE KLVAMLVKTR GAKSKATLDA SATIFSSSFA MIAAMTAALF
VLAIVIAEQV VRRLASQLGG EPADAKAIAA DIARGDLTRP IPLGRHDRDS MVRALSDMQT
GLAATVGEIA VSAEAIAAAS GEISTGNLDL SRRTEQQAVA LERTAASMEE LTSTVRQNAE
NARQASALAA NASAVAEAGG EVVGRVVATM SEIDDSAKNI RDIIGTIEGI AFQTNILALN
AAVEAARAGE QGRGFSVVAG EVRLLAQRAA SAAKEIRTLI GASVERVANG AALAHDAGRT
MDDVVRAVKR VTDIIGEISA ASDEQSAGID EIGRAVMQMD SGTQQNAALV EQAAAAANAL
DEQAQALKSL VGRFRVAA
|
|---|
| |