| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_1317 |
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| Symbol | |
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| ID | 4309026 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008390 |
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| Strand | + |
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| Start bp | 1443890 |
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| End bp | 1445251 |
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| Gene Length | 1362 bp |
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| Protein Length | 453 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 638149126 |
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| Product | peptidoglycan-binding LysM |
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| Protein accession | YP_773209 |
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| Protein GI | 115351370 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4254] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGATCGCGC GCATCACGCA GCGCACGCCG GGCCTGCGCA CGGCGGCACT GCGCGCGGCG
TGCGTGGTCG CGCTGGCATG CGCGGCACAG CAGGCCGCCG CGCGGCCGCC GGCTGCCGCG
GGCAAGACGA TCGTCTACCG CACGCAAGCC GGCGACACGC TGTACGACGT CGCCGCGCGC
TACCTGCAGG GCCCGGACGA CTGGCAGCTG CTGCAGCAGA TCAACGGCGT ACCCGCCCCG
AAGCACCTGC AGCCCGGCAT CGCGCTGAAG CTGCCGGTCG CGCGGCTGCG CAAGGAAAAG
CTGACCGCGC GCGTCGTCGC GGTGCAGGGT GCGGCCGAGC GCACGTCCGG CGACGCCTAC
GCGCCGCTCG CCGACGATGC GACGCTCAAC GAGGGCGACC GCGTGCGTAC CGGCGCGAAC
GGTTTCGTGA CGATCGAGCT CACCGACGGC ACGCACATGA GCCTGCCGCC CGACAGCCAG
CTCGACCTGA AGACGCTGCG CCGCACCGTG CTGACCGGCA CGCTCGATCG CGAGTTCGAG
CTCACGCGCG GCTCGGTCGA CAGCGAAGTC ACGCATCTGA AGAAACGCGA CGACCGCTTC
CAGATCCGCT CGCCGTCGGT CGTGGCCGGC GTGCGCGGCA CGCGTTTTCG CGTGAACTAC
GACGCGGCCG GCAACGCGGC GACGCGCGTC GAAGTGCTCG ACGGCACCGT CGGCGTCGCG
GGCAAGCGGC AACCGGCCGA CCCGACGCTC GTGCATGCGA ACTTCGGCAG CGTCGCGACG
TCGTCCGGCG CGATCGGCGC GCCCGTCGAG CTGCTGCCCG CACCGGCGCT CACGCATCCG
GACAAGGTGC AGGACGAGCC CGACGTCGCG TTCGACATCG CGCCGCTCGC CGACGCGCAC
GCATACCACC TGCAGCTCGC GCACGACGCG GGCATGCTCG ACCTGTTCCG CGAAACCCGC
ACCGATACGC CGAGCGCGGT GTTTCGCGAC GTGCCGAACG GCACGTATTT CGTGCGGGTC
GCCGCGATCG ACACCAACGG CCTCGAAGGC ATGCCGCGCA CCTATGCGTT CGAGCGGCGC
CAGATGGGGC TCGACGCGAG CGCGTCGCCC GGCGCCGGCG GCTACGAGTT CCGCTGGTCG
CCCAACGGCT CCGGCAAGGA TGCGCGCTAC CGGTTCGTGC TGTCGCGCTC GAAGGACCTG
AGCGCGCCGG TCGTCGACCA GGTCGGCCTG CACGCGCGCA AGATCACCGT CGCGCACCTG
CCGCCCGGCG ACTACTACTG GGCGGTGACG GTCGAGGAGT TCGAAGGCGG CAAGTTCTAC
CAGAAGACGA GTCCGGTCAG CGCGTTCACG TTGTCGCGCT GA
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| Protein sequence | MIARITQRTP GLRTAALRAA CVVALACAAQ QAAARPPAAA GKTIVYRTQA GDTLYDVAAR
YLQGPDDWQL LQQINGVPAP KHLQPGIALK LPVARLRKEK LTARVVAVQG AAERTSGDAY
APLADDATLN EGDRVRTGAN GFVTIELTDG THMSLPPDSQ LDLKTLRRTV LTGTLDREFE
LTRGSVDSEV THLKKRDDRF QIRSPSVVAG VRGTRFRVNY DAAGNAATRV EVLDGTVGVA
GKRQPADPTL VHANFGSVAT SSGAIGAPVE LLPAPALTHP DKVQDEPDVA FDIAPLADAH
AYHLQLAHDA GMLDLFRETR TDTPSAVFRD VPNGTYFVRV AAIDTNGLEG MPRTYAFERR
QMGLDASASP GAGGYEFRWS PNGSGKDARY RFVLSRSKDL SAPVVDQVGL HARKITVAHL
PPGDYYWAVT VEEFEGGKFY QKTSPVSAFT LSR
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