Gene Bamb_1305 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_1305 
Symbol 
ID4309014 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008390 
Strand
Start bp1431217 
End bp1432791 
Gene Length1575 bp 
Protein Length524 aa 
Translation table11 
GC content67% 
IMG OID638149114 
ProductABC transporter related 
Protein accessionYP_773197 
Protein GI115351358 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1129] ABC-type sugar transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTACAG CCAGGATGGC GCGCCCGATG GCCAACGAAA GCGCGCCGGC CGCGTCGTTC 
GCCGCGCCGG GTTCGTCCGG TGCGCCCGTC GCCGATTGCC TGCTCGAGGT GCGCGGCGTC
GGCAAGTCGT TTCCCGGCGT CGTCGCGCTC GACGGCGTGC AGTTCCGCGT GCGCCGCGGC
ACCGTGCATG CGCTGATGGG TGAGAACGGC GCCGGCAAGT CGACGCTGAT GAAGATCATC
GCCGGCGTCT ACACGCCCGA CCAGGGCGAG ATCCTGATCA ACGGCGAGCC CGTCGTGCTG
AGCGGCCCGC TCGACGCGCT CGATCGCGGG ATCGCGATGA TTCACCAGGA ACTCAACCTG
ATGCCGTACA TGACGGTCGC GGAGAACATC TGGATCCGCC GCGAACCGAA GAACCGCTTC
GGCCTGATCG ATCATGCCGC GCTGCGCCGC CGCACCGCCG CGCTGTTCGA GCGGCTGTCG
ATCGACATCG ACCCGGAAGC CGACGTGCGC ACGCTGACGG TCGCGAGCCG CCAGATGGTC
GAGATCGCGA AGGCCGTGTC GTTCGACTCC GACGTGCTGA TCATGGACGA GCCGACCTCC
GCGCTGACCG ACAAGGAGGT CTCGCACCTG TTCCGGATCA TTCGCCAGCT GCGCGAGCAG
GGCAAGGGCA TCGTCTACAT CACGCACAAG ATGAACGAGC TGTTCGAGAT CGCCGACGAG
TTCTCGGTGT TCCGCGACGG CAAGTACATC GGCACGCATG CGTCGACCGA CGTCACGCGC
GACGACATCA TCCGGATGAT GGTCGGCCGC GAGATCACGC AGATGTTCCC GAAGGAGGAC
GTGCCGATCG GCGACGTCGT GCTGGCCGTG AAGAACCTCG GCGTCGACGG CGTGTTCCGC
GACGTCAGCT TCGAACTGCG CGCGGGCGAG ATCCTCGGCG TCGCGGGCCT GGTCGGCTCG
GGGCGCTCGA ACGTCGCGGA GGCGCTGTTC GGCGTCGTGC CCGCGACCGC CGGCGAGATC
CGCATCGACG GCAAGCCGGT GCGCATCACG ACGCCCGCGC AGGCGATGAA GCACGGGATG
GCGTTTCTCA CCGAGGACCG CAAGGACACC GGCTGCTTCC TGAATCTCGA CCTGCTCGCG
AACATGGAAG CGGCCGTGCT CAGCAACCGC TACGTGAAGT TCAATTTCGT GCGGCAGGCG
CAGTTGAAAC GCGACTGCGA GGCAATGAGC CGGATGCTGC GCGTGAAGAC GCCCGGGCTG
CACGAGGAAA TCCAGAACCT GTCGGGCGGC AACCAGCAGA AGGTGCTGAT CGGCCGCTGG
CTGCTCACGC AGCCGCGCAT CCTGATCCTC GACGAACCGA CGCGCGGGAT CGACGTCGGC
GCGAAGGCCG AGATCCACCG CCTCGTCAGC GCGCTCGCCG GCAAGGGCGT CGCGGTCCTG
ATGATCTCGT CGGAGATGCC GGAGGTGCTC GGCATGAGCG ACCGCGTGAT GGTGATGCAC
GAAGGCCGGA TGACCGGCAT CGTCGAACGC AAGGACGCCG ACCAGGTCCG CATCATGGAC
CTGGCCTCGC GCTGA
 
Protein sequence
MFTARMARPM ANESAPAASF AAPGSSGAPV ADCLLEVRGV GKSFPGVVAL DGVQFRVRRG 
TVHALMGENG AGKSTLMKII AGVYTPDQGE ILINGEPVVL SGPLDALDRG IAMIHQELNL
MPYMTVAENI WIRREPKNRF GLIDHAALRR RTAALFERLS IDIDPEADVR TLTVASRQMV
EIAKAVSFDS DVLIMDEPTS ALTDKEVSHL FRIIRQLREQ GKGIVYITHK MNELFEIADE
FSVFRDGKYI GTHASTDVTR DDIIRMMVGR EITQMFPKED VPIGDVVLAV KNLGVDGVFR
DVSFELRAGE ILGVAGLVGS GRSNVAEALF GVVPATAGEI RIDGKPVRIT TPAQAMKHGM
AFLTEDRKDT GCFLNLDLLA NMEAAVLSNR YVKFNFVRQA QLKRDCEAMS RMLRVKTPGL
HEEIQNLSGG NQQKVLIGRW LLTQPRILIL DEPTRGIDVG AKAEIHRLVS ALAGKGVAVL
MISSEMPEVL GMSDRVMVMH EGRMTGIVER KDADQVRIMD LASR