Gene Bamb_1302 details

Gene Information

• Locus tag: Bamb_1302
• ID: 4309011
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia ambifaria AMMD
• Kingdom: Bacteria
• Replicon accession: NC_008390
• Strand: -
• Start bp: 1426010
• End bp: 1427893
• Gene Length: 1884 bp
• Protein Length: 627 aa
• Translation table: 11
• GC content: 71%
• IMG OID: 638149111
• Product: thiamine pyrophosphate binding domain-containing protein
• Protein accession: YP_773194
• Protein GI: 115351355
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG3962] Acetolactate synthase

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACCACCA CCGTGAGACT GACCGTCAGC CAGGCGCTCG TGCGCTACCT GGCCGCCCTG 
CGCGCCGAAG TCGTCCAGCC GGACGGCCGC ACCGAGATCC TGCCGTACTG CGGCGGCGTG 
TTCGCGATCT TCGGTCATGG CAACGTCGCC GGGCTCGGCG AGGCGCTCTA CGCCGAACGG 
GAGCAACTGC CGACGTTCCG TGCGCATAAC GAGCAAGGCA TGGCGAATGC GGCCGTCGCG 
TTCGCGAAGG CGAATTTCCG CCAGCGGATG ATGGCCGCGA CGTCGAGCAT CGGCCCCGGC 
GCGACCAACA TGCTGACCTC GGCCGCGCTC GCGCACGTCG GCCGGCTGCC GCTGTTGCTG 
CTGCCCGGCG ACGTGTTCGT GTCGCGGCTG CCCGATCCGG TGCTGCAGCA GGTCGAGGAC 
TTCGAACAGG GCGACGTCAG CGCGAACGAC TGCTTCCGGC CGGTGACGCG CTACTTCGAC 
CGGATCACGT CGCCCGAGCA GCTGCTGGTC GCGCTGCCGC GCGCGATCCA GGTGATGACC 
GATCCCGCGC AGTGCGGCCC CGTGTGTCTC GCGCTGCCGC AGGACGTGCA GACCTTCGCG 
TACGACTGGC CCGAGGACTT CTTCGCGCCG CCGGTGATCC GGATGCGCCG GCCGCCGGCC 
GACGCGCTCG AACTCGCGGA TGCGCTCGAC GTGCTGAAGG CCGCGAAGAA GCCGCTGATC 
GTCGCCGGCG GCGGCGTGCT GTACAGCCAG GCGTGGGACG CGCTGCGCAC GTTCGCCGAC 
ACGCACGGCG TGCCGGTCGC CGAATCGCAG GCCGGCAAGG GCAGCCTCGC GTGGGACCAC 
CCGCTGAACC TCGGATCGAT CGGCGTGACG GGCTCGCCCG CCGCGAACCG CGCGGCCGCG 
CAGGCCGACG TGGTGTTCGC CGTCGGCACG CGCCTGCAGG ACTTCACGAC CGGCTCGCAC 
GCGCTGTTCG GCCATGCCAC GCTGCTGAGC CTGAACGTGC AGCCGTTCGA CGCGGGCAAG 
AAGCGCGGCC GGCAACTGAT CGCCGATGCG CGCACCGGCC TCGGCCAGTT GTCCGCCGCG 
CTCGCGGGCT GGCGCGCGGA TGCGGGATGG ACGGCCGCGA ACCGCGACCA GGCCGCCGCG 
TGGAACGCGC GCGTGACCGA GCTGACCACG CGCGTGCCGA ACGACACGCT GCCGTACGAC 
GCGGAAGTGA TCGGCGCGGT GCGCGACTCC GCGGCCGACG CGGGGCGCGA CAGCGCGCGC 
GACGATCTCG TCGTGTGCGC GGCCGGCACG CTGCCGGCCG AGCTGCACAA GCTGTGGCGC 
AGCGGCGTGC CGGGCAACTA CCACATGGAC TATGCGTACT CGTGCATGGG CTACGAGATC 
GCGGGCGGCC TCGGCGCGAA GCTCGCGCGG CCCGAGCGCG AAGTGATCGT GATCGTCGGC 
GACGGCTCGT ACATGATGCT CAACGCGGAA CTCGCGACCT CCGTGATGCT CGGCCGCAAG 
CTCATCGTCG TGATCCTCGA CAACCGCGGC TACGGCTGCA TCGAGCGGCT GCAACTGAAT 
TGCGGCGGCG CGAGCTTCAA CAACATGCTC GACGACTGCG TGCCGGAAGG CGGCGAGCGC 
TCGACGATCG ACTTCGCGAT GCATGCGCGC GCGATGGGCG CCGAAGCCGT GCACGTGCGC 
GACGTCGGCG AGCTGCGCCG CGAGATGAAG CGTGCGCGCG CGGCCACGAC GAGTCAGGTG 
CTCGTGATCG ACACGACGCA CGAGCGCACG ACCGCGGACG GCGGCGCGTG GTGGGAAGTC 
GCGGTGCCGC AGGTGTCCGC CCGCGCCGGC GTCGAACGCG CGCACCACGC GTATCTCGAC 
GAGAAAACCC GGCAGCGGCG CTGA 

 

Protein sequence

MTTTVRLTVS QALVRYLAAL RAEVVQPDGR TEILPYCGGV FAIFGHGNVA GLGEALYAER 
EQLPTFRAHN EQGMANAAVA FAKANFRQRM MAATSSIGPG ATNMLTSAAL AHVGRLPLLL 
LPGDVFVSRL PDPVLQQVED FEQGDVSAND CFRPVTRYFD RITSPEQLLV ALPRAIQVMT 
DPAQCGPVCL ALPQDVQTFA YDWPEDFFAP PVIRMRRPPA DALELADALD VLKAAKKPLI 
VAGGGVLYSQ AWDALRTFAD THGVPVAESQ AGKGSLAWDH PLNLGSIGVT GSPAANRAAA 
QADVVFAVGT RLQDFTTGSH ALFGHATLLS LNVQPFDAGK KRGRQLIADA RTGLGQLSAA 
LAGWRADAGW TAANRDQAAA WNARVTELTT RVPNDTLPYD AEVIGAVRDS AADAGRDSAR 
DDLVVCAAGT LPAELHKLWR SGVPGNYHMD YAYSCMGYEI AGGLGAKLAR PEREVIVIVG 
DGSYMMLNAE LATSVMLGRK LIVVILDNRG YGCIERLQLN CGGASFNNML DDCVPEGGER 
STIDFAMHAR AMGAEAVHVR DVGELRREMK RARAATTSQV LVIDTTHERT TADGGAWWEV 
AVPQVSARAG VERAHHAYLD EKTRQRR