| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_1298 |
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| Symbol | |
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| ID | 4311696 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008390 |
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| Strand | + |
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| Start bp | 1422777 |
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| End bp | 1423523 |
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| Gene Length | 747 bp |
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| Protein Length | 248 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 638149107 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_773190 |
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| Protein GI | 115351351 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCAAGC TGACAAACAA GGTTGCGATC GTCACGGGCG GGTCCAAGGG CATCGGCGCC
GCGATCGCGA AGGCGCTGGC CGCCGAAGGT GCGTCGGTCG TCGTCAACTA CGCGAGCAGC
AAGGCCGGTG CCGATGCCGT CGTGAGCGCG ATCGTCGAAG CAGGCGGCCG CGCGGTCGCG
GTGGGCGGCG ACGTGTCGAA GGCAGCGGAC GCGCAGCGCA TCGTCGATGC CGCGATCGAG
AACTATGGCC GTCTCGACGT GCTGGTCAAC AATTCCGGCG TCTACGAATT CGCGCCGATC
GAGGCGATCA CCGAAGAGCA CTATCGCCGG CAGTTCGATA CGAACGTGTT CGGCGTGCTG
CTGACGACGC AGGCCGCCGT CAAGCATCTC GGCGAAGGCG CGAGCATCAT CAACATCAGC
TCGGTCGTGA CGAGCATCAC GCCGCCCGCG AGCGCCGTGT ACAGCGGCAC CAAGGGCGCC
GTCGACGCGA TCACCGGCGT GCTCGCGCTC GAGCTCGGCC CGCGCAAGAT TCGCGTGAAT
GCGATCAACC CGGGGATGAT CGTGACCGAA GGCACGCACA GCGCGGGCAT CATCGGTTCG
GATCTCGAAA CGCAGGTGCG CAACGATACG CCGCTTGGCC GCCTCGGCGA ACCGGGCGAC
ATCGCGTCGG TCGCCGTGTT CCTCGCGTCG GACGATGCGC GCTGGCTGAC CGGCGAGCGC
CTCGTCGCGA GCGGCGGGCT GCACTGA
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| Protein sequence | MSKLTNKVAI VTGGSKGIGA AIAKALAAEG ASVVVNYASS KAGADAVVSA IVEAGGRAVA
VGGDVSKAAD AQRIVDAAIE NYGRLDVLVN NSGVYEFAPI EAITEEHYRR QFDTNVFGVL
LTTQAAVKHL GEGASIINIS SVVTSITPPA SAVYSGTKGA VDAITGVLAL ELGPRKIRVN
AINPGMIVTE GTHSAGIIGS DLETQVRNDT PLGRLGEPGD IASVAVFLAS DDARWLTGER
LVASGGLH
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