Gene Bamb_1297 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_1297 
Symbol 
ID4311695 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008390 
Strand
Start bp1421909 
End bp1422613 
Gene Length705 bp 
Protein Length234 aa 
Translation table11 
GC content75% 
IMG OID638149106 
ProductABC transporter related 
Protein accessionYP_773189 
Protein GI115351350 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0410] ABC-type branched-chain amino acid transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGCGC TGCTCGACAT TCGCGGCCTG CGCGCGTGGT ACGGGAGGCA GCCCGTGCTC 
GACGGCGTCG ATCTCGCGCT CGCGCCGGGC GAGACGCTCG CGCTGCTCGG GCGCAACGGC
TCGGGCCGTT CGACGCTCGC GAAGGCCGTG ATGGGGCTCG TGCGCACCGC GGGCTCGGTG
CGTATCGCCG GCGCCGAATG CGCGGGCGCC CGCACGTTCG AGATCGCGCG GCGCGGTGTG
GCTTACGTCG CCGAAAGCCG CGACGTGTTT CCGCTGCTGA GCGTGCGCGA GAACCTGCGG
CTCGGGCTGC GCGGTGTGCG CGGCGCGGCC GAACGCACGG CCCTCGACCG GCTGCTCGCG
CGCTTTCCGC TGCTGGCCGC GCGGATCGAC GTGAAGGCCG GGCGGCTGTC GGGCGGCGAG
CAGCAGGTGC TCGCGCTGGT GCGTGCGCTT GCCGGCCGCC CGCGCGTGCT GATCGTCGAC
GAGCCGGCCG AAGGGCTCGC GCCGCTCGCG GTCGACGAGG TCGGGGCGTG CCTCGCCGCG
CTGCAGGCCG ACGGCGTCGC GATCCTGCTG ATCGAGCAGC GACTGCAGCT CGCGCCGCGG
CTCGCGCAGC GCGTCGCGGT GATGGGGCGC GGACGGATCG TCTACGACGG CGCGCTCGAC
GGGTTGGGCG GCGACGTCGT CAGTGCGTGG CTGAGCGCTG GCTGA
 
Protein sequence
MSALLDIRGL RAWYGRQPVL DGVDLALAPG ETLALLGRNG SGRSTLAKAV MGLVRTAGSV 
RIAGAECAGA RTFEIARRGV AYVAESRDVF PLLSVRENLR LGLRGVRGAA ERTALDRLLA
RFPLLAARID VKAGRLSGGE QQVLALVRAL AGRPRVLIVD EPAEGLAPLA VDEVGACLAA
LQADGVAILL IEQRLQLAPR LAQRVAVMGR GRIVYDGALD GLGGDVVSAW LSAG