| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_1286 |
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| Symbol | alaS |
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| ID | 4311684 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008390 |
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| Strand | + |
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| Start bp | 1407381 |
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| End bp | 1410005 |
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| Gene Length | 2625 bp |
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| Protein Length | 874 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 638149095 |
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| Product | alanyl-tRNA synthetase |
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| Protein accession | YP_773178 |
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| Protein GI | 115351339 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0013] Alanyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00344] alanine--tRNA ligase
[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGCTG CCGAAATCCG CGAGAAATTC CTCAAATTCT TCGAATCGAA GGGCCACACG
ATCGTCCGCT CGTCGAGCCT CGTGCCCGGT AACGACCCCA CGCTGATGTT CACGAACTCG
GGCATGGTCC AGTTCAAGGA CGTATTCCTC GGCACGGACC CGCGTCCGTA CTCGCGCGCC
ACGACGGCGC AGCGCAGCGT GCGCGCGGGC GGCAAGCACA ACGACCTCGA GAACGTCGGC
TACACGGCGC GCCACCACAC GTTCTTCGAG ATGCTCGGCA ACTTCTCGTT CGGCGACTAC
TTCAAGCACG ACGCGATCCG CTTCGCGTGG GAGCTGCTGA CCACGGTCTA CCAGCTGCCG
AAGGAAAAAC TGTGGGTCAC CGTCTACCAG GAAGACGACG AAGCCTACGA CATCTGGGCG
AAGGAAGTCG GCGTGCCGAC CGAGCGGATC ATCCGGATCG GCGACAACAA GGGCGCGCGC
TACGCGTCGG ACAACTTCTG GACGATGGGC GACACCGGCC CGTGCGGCCC GTGCACGGAA
ATCTTCTACG ACCACGGCCC GGACGTGTGG GGCGGCCCGC CGGGGTCGCC TGAGGAAGAC
GGCGACCGCT ACATCGAGAT CTGGAACCTC GTGTTCATGC AGTTCAACCG CGACGCGCAG
GGCAACATGA CGCGCCTGCC GAAGCAGTCG GTCGACACCG GCATGGGCCT CGAGCGCCTC
GCCGCGGTGC TGCAGCACGT GCACAGCAAC TACGAGATCG ACCTGTTCCA GAACCTGATC
AAGGCCGCCG CGCGCGTGAC CGAGATCAGC GACCTCACCA ACAACTCGCT GAAGGTGATC
GCCGATCACA TCCGCGCGTG CTCGTTCCTG ATCGTCGACG GCGTGATTCC GGGCAACGAA
GGACGCGGCT ACGTGCTGCG CCGGATCGTG CGCCGCGCGA TCCGCCACGG CTACAAGCTC
GGCCGCAAGG GCTCGTTCTT CCACAAGCTG GTGGCCGACC TCGTCGCCGA GATGGGCGCG
GCCTATCCGG AGCTGAAGGA AGCCGAGCAG CGCGTGACCG ACGTGCTGCG CCAGGAAGAA
GAGCGCTTCT TCGAAACCAT CGAGCACGGG ATGTCGATCC TCGAGGCGGC ACTCGCCGAC
GTCGAGGCGA AGGGCGGCAA GGTGCTCGAC GGCGAGCTCG CGTTCAAGCT GCACGACACC
TACGGCTTCC CGCTCGACCT CACGGCCGAC GTGTGCCGCG AGCGCGGGAT GACGGTCGAC
GAGCCGGCAT TCGACGACGC GATGGCGCGC CAGCGCGAGC AGGCGCGCGC GGCCGGCAAG
TTCAAGGCCA CGCAGGGGCT CGAATACTCG GGCGCGAAAA CCACGTTCCA CGGTTACGAG
GAAATCGCGT TCGACGACGC GAAGGTCGTC GCGCTGTACG TCGACGGTTC GGCCGTCAAC
GAAGTGAAGG CCGGCCAGGA TGCGGTCGTG GTGCTCGACC ACACGCCGTT CTACGCGGAA
TCGGGCGGCC AGGTCGGCGA CCAGGGCGTG CTCGCGAACG CCGCGACGCG CTTCGCGGTG
GCCGACACGC TGAAGGTGCA GGCCGACGTG GTCGGCCATC ACGGCACGCT GGAGCAGGGC
ACGCTGAAGA TCGGCGACGT GCTGCGCGCG GAAATCGACG CGCACCGCCG CGCCCGCACG
CAGCGCAACC ACTCGGCCAC CCATCTGATG CACAAGGCGC TGCGTGAAGT GCTCGGCGCG
CACGTGCAGC AGAAGGGTTC GCTCGTCGAT GCGGAGAAAA CCCGTTTCGA CTTCGCGCAC
AACGCGCCGA TGACCGACGA CGAAATCCGT CGCGTCGAGC AGATCGTCAA CAACGAAATC
CTCGCGAACG CGCCGGGCAT CGTGCGCGTG ATGCCGTATG ACGAAGCGGT GAAGGGCGGC
GCGATGGCGC TGTTCGGCGA GAAGTACGGC GACGAAGTGC GCGTGCTCGA TCTTGGCTTC
TCGCGCGAAC TGTGCGGCGG CACGCACGTG CATCGCACCG GCGACATCGG CTTCTTCAAG
ATCGTCGTCG AAGGCGGCGT CGCGGCCGGC ATCCGCCGGG TCGAGGCGAT CACCGGCGAC
AACGCGGTGC GTTACGTGCA GGAACTCGAT GCGCGCGTGA ACGAAGCCGC GGCCGCGCTG
AAGGCGCAAC CGTCGGAACT CACGCAGCGC ATCGCGCAGG TGCAGGACCA GGTGAAGTCG
CTCGAGAAGG AACTGGGCGC GCTGAAGTCG AAGCTCGCGT CGAGCCAGGG CGACGAGCTC
GCGCAGCAGG CCACCGAAAT CGGCGGCGTG TATGTGCTGG CCGCGACACT CGACGGCGCG
GACGCGAAGA CGCTGCGCGA GACGGTCGAC AAGCTGAAGG ACAAGCTGAA GAGCGCGGCG
ATCGTGCTGG CGGCCGTCGA AGGCGGCAAG GTCAGCCTGA TCGCGGGCGT CACGCCGGAT
GCGAGCAAGA AGGTCAAGGC CGGCGAGCTC GTGAACTTCG TCGCGCAGCA GGTGGGCGGC
AAGGGCGGCG GCCGTCCCGA TATGGCGCAG GCGGGCGGCA CCGAACCGGC GAACCTGCCG
GGTGCGCTGG CCGGCGTGAA GGGCTGGGTC GAAGAGCGGT TGTAA
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| Protein sequence | MKAAEIREKF LKFFESKGHT IVRSSSLVPG NDPTLMFTNS GMVQFKDVFL GTDPRPYSRA
TTAQRSVRAG GKHNDLENVG YTARHHTFFE MLGNFSFGDY FKHDAIRFAW ELLTTVYQLP
KEKLWVTVYQ EDDEAYDIWA KEVGVPTERI IRIGDNKGAR YASDNFWTMG DTGPCGPCTE
IFYDHGPDVW GGPPGSPEED GDRYIEIWNL VFMQFNRDAQ GNMTRLPKQS VDTGMGLERL
AAVLQHVHSN YEIDLFQNLI KAAARVTEIS DLTNNSLKVI ADHIRACSFL IVDGVIPGNE
GRGYVLRRIV RRAIRHGYKL GRKGSFFHKL VADLVAEMGA AYPELKEAEQ RVTDVLRQEE
ERFFETIEHG MSILEAALAD VEAKGGKVLD GELAFKLHDT YGFPLDLTAD VCRERGMTVD
EPAFDDAMAR QREQARAAGK FKATQGLEYS GAKTTFHGYE EIAFDDAKVV ALYVDGSAVN
EVKAGQDAVV VLDHTPFYAE SGGQVGDQGV LANAATRFAV ADTLKVQADV VGHHGTLEQG
TLKIGDVLRA EIDAHRRART QRNHSATHLM HKALREVLGA HVQQKGSLVD AEKTRFDFAH
NAPMTDDEIR RVEQIVNNEI LANAPGIVRV MPYDEAVKGG AMALFGEKYG DEVRVLDLGF
SRELCGGTHV HRTGDIGFFK IVVEGGVAAG IRRVEAITGD NAVRYVQELD ARVNEAAAAL
KAQPSELTQR IAQVQDQVKS LEKELGALKS KLASSQGDEL AQQATEIGGV YVLAATLDGA
DAKTLRETVD KLKDKLKSAA IVLAAVEGGK VSLIAGVTPD ASKKVKAGEL VNFVAQQVGG
KGGGRPDMAQ AGGTEPANLP GALAGVKGWV EERL
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