| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_1285 |
|---|
| Symbol | |
|---|
| ID | 4311683 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria AMMD |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008390 |
|---|
| Strand | - |
|---|
| Start bp | 1405932 |
|---|
| End bp | 1407212 |
|---|
| Gene Length | 1281 bp |
|---|
| Protein Length | 426 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 638149094 |
|---|
| Product | L-carnitine dehydratase/bile acid-inducible protein F |
|---|
| Protein accession | YP_773177 |
|---|
| Protein GI | 115351338 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1804] Predicted acyl-CoA transferases/carnitine dehydratase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTCGGCA TGCCGATCCG CGTTGCCCGA CGCCAAGCCA TGAAAGGAGA CGATTCGACG
ATGGGTGCCC TGAGCCATAT CCGCGTGCTG GACCTCACCC GCGTGCTCGC GGGCCCGTGG
TGCGCGCAGA CCCTTGCCGA TTTCGGCGCG GACGTGATCA AGATCGAGCG CCCCGGCGCC
GGCGACGACA CGCGCCACTG GGGGCCGCCG TACCTGAAGG ACGCAGCCGG CGCCGATACG
GCCGAGGCCG CGTACTACCT CGCGGCGAAC CGCAACAAGC GCTCGGTCAC GGTCGACATC
GCGACGCCGG AAGGCCAGCA GATCGTGCGC GAGCTCGCCG CGCAAAGCGA TGTCGTGCTG
GAGAACTACA AGGTCGGGCA GCTCGCGAAA TACGGACTCG ACTACGAATC GCTGCGCGCG
GTGAAGCCCG ATCTCGTCTA CTGCTCGGTC ACGGGTTTCG GCCAGACGGG CCCGTACGCG
CATCGCGCGG GCTACGACTT CATCGTCCAG GGCATCGGCG GCTTCATGAG CATCACCGGC
GAGCGCGACA GCGAGCCGGG CGGCGGCCCG CAGAAGGCCG GCGTCGCGAT CGCCGATCTC
GCGACGGGCC TCTATTCGAC GATCGCGGTG CTCGCCGCGC TCGCGCATCG CGACCGCACG
GGCGAAGGCC AGTACATCGA CATGGCGCTG CTCGACGTGC AGGTCGCGCT GCTCGCGAAC
ATGAACACCA ACTTCCTCGC GAGCGGCAAG CCGCCGGTGC GCTGGGGCAA CGCGCACCCG
AACATCGTGC CGTATCAAAC CTTCCAGACG AGCGACGGCT GGATCATCGT CGCGGTCGGC
AACGACGGGC AGTTCCGCAA GTTCGTCGAG GCCGGCGGCC GCGCCGAGCT GGCCGACGAC
GAACGGTTCG CGACCAATCC GTCGCGCGTG CGCCATCGCG ACACGCTGGT GCCGATCCTC
GCGGAGATGG TGAAGACCCG CGCCAAGGCC GACTGGATCG GCACGCTGGA AGCGGCCGGC
GTGCCGTGCG GGCCGATCAA CGAACTCGAC GAAGTGTTCG ACAACGAACA GGTGGTCGCG
CGCGGGATGC AGGTGTCGCT GCCGCATCCG TGCGGCGCGG ACGTGAAGCT CGTGCGCAAT
CCGATCCGGA TGAGCGCGAC GCCGCCCGAT GCGCGCACGG CCCCGCCGCT GCTCGGCGCG
CAGACCGAAG CGGTGCTGCG CGACATGCTC GGCTACGACG CGGCGCGCAT CGCCGCGTTG
AAGGCGAAGC AGGCGATCTG A
|
|---|
| Protein sequence | MVGMPIRVAR RQAMKGDDST MGALSHIRVL DLTRVLAGPW CAQTLADFGA DVIKIERPGA
GDDTRHWGPP YLKDAAGADT AEAAYYLAAN RNKRSVTVDI ATPEGQQIVR ELAAQSDVVL
ENYKVGQLAK YGLDYESLRA VKPDLVYCSV TGFGQTGPYA HRAGYDFIVQ GIGGFMSITG
ERDSEPGGGP QKAGVAIADL ATGLYSTIAV LAALAHRDRT GEGQYIDMAL LDVQVALLAN
MNTNFLASGK PPVRWGNAHP NIVPYQTFQT SDGWIIVAVG NDGQFRKFVE AGGRAELADD
ERFATNPSRV RHRDTLVPIL AEMVKTRAKA DWIGTLEAAG VPCGPINELD EVFDNEQVVA
RGMQVSLPHP CGADVKLVRN PIRMSATPPD ARTAPPLLGA QTEAVLRDML GYDAARIAAL
KAKQAI
|
|---|
| |