Gene Bamb_1266 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_1266 
Symbol 
ID4311664 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008390 
Strand
Start bp1387556 
End bp1388440 
Gene Length885 bp 
Protein Length294 aa 
Translation table11 
GC content71% 
IMG OID638149075 
Productpirin domain-containing protein 
Protein accessionYP_773158 
Protein GI115351319 
COG category[R] General function prediction only 
COG ID[COG1741] Pirin-related protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCGCAT CGATCAAGAC CGTACTCACG CCTCGCGAAA GCGACATCGG CAACCTCGTC 
GTGCGCCGCG TGCTGCCCGC GCGCGCCGCG CGCCTCGTCG GCCCGTTCAT CTTCTTCGAC
GAAATGGGGC CGGCCGTGCT GCCCGCCGGC AGCGGCATCG ATGTGCTGCC GCATCCGCAC
ATCGGTCTCG CGACCGTCAC CTACCTGTTC GACGGCACGC TGATGCATCA CGACAGCCTC
GGCTTCCGGC AGAAGATCGT GCCCGGCGAC GTGAACTGGA TGACGGCCGG ACGCGGCATC
GTCCACTCGG AGCGTTCGCC CGACGAGGAC CGGCCGCTCG AGCAGCCCGT GCACGGAATC
CAGACCTGGG TCGCGCTGCC GGTCGAGCAC GAGGACACGG CGCCCGCGTT CGCGCATCAC
GCGGCCGACA CGCTGCCGTC GTTCACGCGC GACGGCGCGA GCGTGCGCGT GATCGCGGGC
ACCGCGTTCG GGCTCACGTC GCCGGTCGCC GTGTTCTCGC CGACGCTCTA TGCGTATGCG
GAATTCGCGG CGGGCGGCCA ACTCGCGCTC GACGCGGAGC ACGACGAGCG CGGCGTGTAT
CTCGTCGACG GCGACCTCAC GATCGACGGC ACGCCGCTCG CCCCCGCGAC GATGGCCGTG
CTGGAACCGG GCGCGACCGT GGCGCTCGCG AGTGCGAACG GCGCGCGCGT GATGCTGCTC
GGCGGTGCGC ACCTGCCCGG CGAGCGGTTC ATCGAATGGA ATTTCGTGTC GAGCGAGCGC
GCGAAGATCG AGGCGGCCCG CAACGCGTGG GCCGCGCAGA CCTTCGGCAA GGTGCCGGGC
GAGGAAAACG AATGGACGCG CCAGCCGGCG CGCAAGGCGC AGTAA
 
Protein sequence
MSASIKTVLT PRESDIGNLV VRRVLPARAA RLVGPFIFFD EMGPAVLPAG SGIDVLPHPH 
IGLATVTYLF DGTLMHHDSL GFRQKIVPGD VNWMTAGRGI VHSERSPDED RPLEQPVHGI
QTWVALPVEH EDTAPAFAHH AADTLPSFTR DGASVRVIAG TAFGLTSPVA VFSPTLYAYA
EFAAGGQLAL DAEHDERGVY LVDGDLTIDG TPLAPATMAV LEPGATVALA SANGARVMLL
GGAHLPGERF IEWNFVSSER AKIEAARNAW AAQTFGKVPG EENEWTRQPA RKAQ