Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_1253 |
Symbol | |
ID | 4309426 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008390 |
Strand | + |
Start bp | 1368193 |
End bp | 1369992 |
Gene Length | 1800 bp |
Protein Length | 599 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 638149062 |
Product | alpha/beta hydrolase fold |
Protein accession | YP_773145 |
Protein GI | 115351306 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG2267] Lysophospholipase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATTCGAA CAACGAAACG AGAGAAACGC ATGAGCGCAC GCACGGCCCG CGAGGCTGAC TTCATCACGC ACGACGGCGA AACGCTGTTC TATCGTCACT GGCCCGCGAC GGGCCCGCGC TGCCGCGGCG CGATCGTGCT GCTGCATCGC GGCCACGAAC ATTCGGCGCG CGTCGCGCAT CTCGTCGACG AGCTCGACCT GCCGGACTTC GCGTTCTTCG CATGGGATGC GCGCGGCCAC GGCCGCTCGC CCGGCGCGCG CGGCTACAGC CCGAGCGCGG CCGCGTCGGT GCGCGACCTG CAGATCTTCG TCGAGCATAT CCGCGACACG CACGGCATCG CGATCGAGGA CATCGCCGTG GTCGGGCAGA GCGTCGGCGC GGTGCTCGCG GCCACCTGGG TACACGATTA CGCGCCGCCG ATCCGCTGCC TCGTGGTCGC GTCGCCGGCG TTCCACATCA AGCTCTACGT GCCGTTCGCG CGGCCGGGGC TGCGGCTGAT GCACAAGCTG CGCGGGCTGT TCTACGTGAA CAGCTACGTG AAACCGAAAT TCCTCACGCA TGACCCCGAA CGGATCGCGA GCTATGCGGC CGATCCGCTG ATCACGCGGC CGATCGCCGT CAACATGCTG CTCGACCTGC ACGACACCGC GAAGCGGATC GTCGCCGATG CGGCCGCGAT CACCGTGCCG ACGCAGCTGC TGATCTCCGG CGCCGACTGG GTCGTCCATC GCGGCCCGCA AGACCGCTTC TTCGAGCGGC TCGGCGCCGT GCGCAAGGAG CGCATCGTGC TGCCCGGCTT CTATCACGAC ACGCTCGGCG AGCGCGACCG CGCGCAGGCG CTCGCGCCGC TGCGCACCTT CGTGCTGCGC GAGTTCGATA CGCCGAGCCC GCGCGTGTCG CTCGCCGACG CCGACCGGCG CGGCGCATTC CACGACGAAT ACGCGGCGCT CGGCCGGCCG CCCGCGAACC CGTTCGCCCG CGCGTACTGG GCGATCACGC GGGCGGGGCT GAAGGCAGGC GGCGCGCTGT CGGACGGCAT CGCGCTCGGG TTGCGGCTCG GCTTCGATTC GGGCTCGACG CTCGACTACG TGTACCGCAA CCGCGCGCAG GGCCGGCTCG GCGTCGGCGC GCTGATCGAC CGCACCTATC TCGATTCGCC GGGCTGGGTC GGCATCCGTC AGCGCAAGGT GCATCTGCAG GAGCTGATCG GCGCGGCGAT CGGGCGGCTG CGCGGCCTCG GCGAACCCGT GCGGATCGTC GACATCGCGG CCGGGCACGG ACGCTATGTG CTCGACGCGA TCGCGACGGC CGCCGAACGC GACGGCGCGG CGCCCGACGA CATCACGCTG CGCGACTACA GCCCGCCGAA CGTCGAGGCC GGACGCGTGC TGATCGCGCA GCGCGGCCTC GAGCCGATCG CGCGCTTCGA GCGCGGCGAC GCGTTCGACG AGGCGTCGCT CGCGACGCTC GAGCCGCGCC CGACGCTCGC GATCGTGTCG GGGCTGTATG AACTGTTCGG CGAGAACGCG CTGATCGAGC GCTCGCTGCG CGGGCTCGCG CAGGCGGTGC CGCCCGGCGG CTATCTCGTC TATACGGGGC AGCCGTGGCA TCCGCAGCTC GAATTCATCG CGCGTGCGCT GAACAACCAT CGCGGCGACG CGACCTGGGT GATGCGCCGC CGCTCGCAGG CCGAGATGGA CGAGCTCGTC GCGCGCGCCG GTTTCCGCAA GCTCGACCAG CGCATCGACG AGATGGGCAT CTTCACGGTG AGCCTCGCGC AGCGGGTCGA CGCGTCGTGA
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Protein sequence | MIRTTKREKR MSARTAREAD FITHDGETLF YRHWPATGPR CRGAIVLLHR GHEHSARVAH LVDELDLPDF AFFAWDARGH GRSPGARGYS PSAAASVRDL QIFVEHIRDT HGIAIEDIAV VGQSVGAVLA ATWVHDYAPP IRCLVVASPA FHIKLYVPFA RPGLRLMHKL RGLFYVNSYV KPKFLTHDPE RIASYAADPL ITRPIAVNML LDLHDTAKRI VADAAAITVP TQLLISGADW VVHRGPQDRF FERLGAVRKE RIVLPGFYHD TLGERDRAQA LAPLRTFVLR EFDTPSPRVS LADADRRGAF HDEYAALGRP PANPFARAYW AITRAGLKAG GALSDGIALG LRLGFDSGST LDYVYRNRAQ GRLGVGALID RTYLDSPGWV GIRQRKVHLQ ELIGAAIGRL RGLGEPVRIV DIAAGHGRYV LDAIATAAER DGAAPDDITL RDYSPPNVEA GRVLIAQRGL EPIARFERGD AFDEASLATL EPRPTLAIVS GLYELFGENA LIERSLRGLA QAVPPGGYLV YTGQPWHPQL EFIARALNNH RGDATWVMRR RSQAEMDELV ARAGFRKLDQ RIDEMGIFTV SLAQRVDAS
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